Gene Sked_32270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32270 
Symbol 
ID8634860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3593178 
End bp3594365 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content75% 
IMG OID 
Productcytidyltransferase-related enzyme 
Protein accessionYP_003315957 
Protein GI269796502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.399426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.498832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTG CAGGGCTGGG TGGGTCTGCC GGTCGGGGCG GAGGACCGGC GCACGAACGG 
TTCCGGCACG GGCTGGTCAT CGGGAAGTTC TACCCGGTGC ACGCGGGGCA CCTGAACCTG
GTGCGGACCG CGCTCGAGCG GTGCGACCAC GTGACGGTCC AGGTCTTGTG GTCCTCGCAG
GAGTCGATCC CGGCCGAGCT CCGCGCCCGG TGGATCTCTG ACGAGCTCCC CGGCGCGCAC
GTGGTCACCG GGTTCGACGA CGCCCCGGTC GACTACGAGT CGGACGACGC CTGGGACGCG
CACGTGTCGG TGATGAAGGA CCTCCTCGAC GACAGCTGCG TCCCCGGGTG CGAGGTCGAG
GCGACGGTCG ACGCGGTCTT CACCTCGGAC GTGTACGGCG CCGAGATGGC GCGGCGCTTC
GACGCCGCCT GGGTGCAGGT CGACCCGGGA CGGGCTGCGG TGAGCGTGAG CGGCACCGCC
GTGCGGTCCG ACCCGGGCGC TCACTGGTGG GCGCTGCCGG GCGCGGTGCG GTCGTGGTTC
GTCCGGCGCG TCGTGGTCCT CGGCGCGGAG TCCACCGGGA CCACGACCCT GGCCGAGGCC
CTGCAGGCGC ACTACGGGCT GCCCGCCGTC CCCGAGTTCG GCCGGGAGTG GTCCGAGGTG
CGCCCCGGAG GTCTCGAGGC GCCGTGGCAC ACGGCCGAGT TCGACCTCGT GGCGCGCGAG
CAGGCACGCG TCGAGGACGA CGCCGCGCGG GGCACGCCGC TCCCCCTCCT GGTGTGCGAC
ACCGACCCCT TCGCGACGAC GCTGTGGCAC GAGCGATACA CCGGGTCGCG CTCGCCGTCC
GTCGAGGCCT TCGCCGCGTC CCGCGTGCCC GACCTGTACC TGCTCACCGG CGACGAGATC
CCCTTCGTGC AGGACGGCCT GCGCGACGGG GAGCACGTGC GGCACGGGAT GCAGCAGCGG
TTCCGGGAGG TCCTCGCGGC CCAGGCGGAC GCGGGCGCTC CCTGGGTCGA GCTGCGGGGC
ACGCGGGAGG AGCGCCTCGC AGAGGCGGTG CGCCTGGTCG ACGCCCTGGT GGCCACGCCG
CGGTGGGTCG CCGACCCGAT GGAGCAGCGC GGCCAGGACG TCGGGGCACC GCTGCCCGAC
CCGGGTCGGA CCGTCGAGAC GAACCCTGGG GCAGGCCGTC GGGCCTGA
 
Protein sequence
MSGAGLGGSA GRGGGPAHER FRHGLVIGKF YPVHAGHLNL VRTALERCDH VTVQVLWSSQ 
ESIPAELRAR WISDELPGAH VVTGFDDAPV DYESDDAWDA HVSVMKDLLD DSCVPGCEVE
ATVDAVFTSD VYGAEMARRF DAAWVQVDPG RAAVSVSGTA VRSDPGAHWW ALPGAVRSWF
VRRVVVLGAE STGTTTLAEA LQAHYGLPAV PEFGREWSEV RPGGLEAPWH TAEFDLVARE
QARVEDDAAR GTPLPLLVCD TDPFATTLWH ERYTGSRSPS VEAFAASRVP DLYLLTGDEI
PFVQDGLRDG EHVRHGMQQR FREVLAAQAD AGAPWVELRG TREERLAEAV RLVDALVATP
RWVADPMEQR GQDVGAPLPD PGRTVETNPG AGRRA