Gene Sked_32060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32060 
Symbol 
ID8634839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3565219 
End bp3568854 
Gene Length3636 bp 
Protein Length1211 aa 
Translation table11 
GC content75% 
IMG OID 
Productdihydroneopterin aldolase/2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_003315936 
Protein GI269796481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT TGGTGCAACG ATCGGTCCTG GATGCGAGCG GCTTCCCGCT CGACCAGATC 
CAGATCCTCG GGATCGCGGC ACGGGGCTTC CACGGGGTGC TCGAGAGCGA GCGCGAGGCG
GGGCAGGACT TCAGCGCCGA CGTGACCCTC TACCTCGACA CCCGGGCTGC GGCTCGTGAC
GACGACCTCG ACGAGACGGT CAACTACGCG CTCGTCGCGC AGGACGTCGT CGACATCCTC
TCGGGCGAGC CCGTCGACCT CATCGAGACC GTCGCGGAGC AGATCGCCGC GGCCGTCCTC
GACCGTCCGC TCGTCGCGTC GGTCGACGTC ACGGTCCACA AGCCGCAGGC GCCGATCCCG
GTCCCCTTCT CGGACGTGAC GGTGACCATC AACCGCGACC GGCTCAACGT GCCCGTGGTG
ACGTCACCGG TCGCCCCCGC ACTGGACGAG CTGCCGGCCG AGGACCTCGC AGAGTCGCGC
GCCGACCTTC CGCTGTCGGT CGAGGAACCG CGCGACCCCG ACGAGCAGGC CTCGGCCGGG
CTGCCGGTGT CGGCACTCCC GGCGGCAGCC CTGCCCGCAG CAGCCCTGCC TGCCGTCTCC
TTCCCCTCCG CCGGCCTGGC CGGCGCCCCG GTCCCGTCGG ACGGGATCCC GGTGGCCGGG
TCTGCCCTCC CGCCGGCGAC CGCCCCCACC GAGCTCCCCG AGGCCTTCGA GCCCGTCGCG
CTGCGGGTCG ACGAGACCGA GAGCGACGTC GCGACCCCGA CACCGTCGTC CAGCCCCACC
CTCGACCTGC CGCTCGGGCG GCTCACTGCC CCCGTCGCCG CACGCGAGTC CGACCCCGCC
AGCTACAGCA CCTCGGAGCT GCACCTCGAG TCGGACCTCG TCCACGACGA GCCCGTCGCG
AGCGACGAGA CCGAGGTGGA CCTCGAGACC GAGCCGGACG TCGAGCCCGC CGCAGCCGAC
GAGACCGCCG CGGCCTCCGA CACCGCTGTG GCCGACGACG ACCTCCTGCC CGTGGACGGC
GACCAGACCA CCACGTCCGC CGCCCTCGTG CCGCCGGTCG ACGACTCGAT CCTCGAGGAG
CAGGCGCGCC TGTCCGAGCA GGCGCGGCGA CCCGAGGTCT TCGGCCTGCG CCCCCGGACC
GACGCGCACC TGCGACCGAC CACGGACGAC ACCGACGACG CGCTGCCCGC CCCGGGCGAC
GACCACGGGC AGCCCGAGCC GGCCGCCTCC GAGGCGGTCG CCTCAGAGGC CCGCGTCTCC
GAGCCTGAGA CGCCCGAGCC CGAGCCCGAG ACGACAGAGC CCGGGAGGAC CGAGCCCACG
GAGGGCTCTC CCTCCGCTGG TCCGCAGATG GGTGCCGCGT TCTTCGCCGC GGCGAGCGCT
GCGGTCCGGA ACGCGAGCCG TGACCGGGCA CCGCTGAGCT TCGAGGAGCT CCTCAACCCG
AGCGCCACCG GCGACCAGCC GGCGGCCCCC GCGGCCACGC CTGCGTCCGG CACCCCGGCC
GACGAGGCCC ACCCCTCTGC CACAGGTGTC ACCGCGGCGC CAGCCGCTGG GCCTGCGGAC
GCCCCGAGCC CCGTCGCCGA GGCCGTCCAG GCGGCTGACG CCGAGCCGGA GCCCGAGGTC
GAGCACGGCC AGAGCCAGCA GCCGACGGCG CCCGCGCCCG TCCAGGAGCC GGGCGACGAC
CACCCGCTCG AGCAGCCAGC CGGCCAGCCG CAGGCGGACG AGACGAAGAC CGACGGCCAC
GCGACGCCGG TGCTCGTCGA GCCGACCGAA GAGGCACCCG TCTGGCAGCC GTCCTCCTTC
GCCTTCCCGC CGACGGGTCT CAGCACACCG ACCGAGCAGG CTGCTCCGGC CGCCCAGGCA
GGACTCCCGG AGAGCGGACA GCAGCCGGCT CCCGTGGACG GCGACACCTC GCGCTTCGCC
CCGCCCGTGG CCCAGCAGCC TCACGGCACC CTCGAGGACC GGGAGCCCGT CGACACCCTC
GAGGCCCAGG ACCCCGTCGA GTCCGTGCCG ACGCTCAGCG AGCCCGAGGA GAGTGCCCTC
GAGACGACGG CGCTGCTGCC CCCGCTCGAC CTCGACGACG AGAGCCGGAC CGCCCCGGGC
GTCGAGGACA CCGGTCCCGA TCGCACCGGT GTCGACGACT CGGTGCCTGA CGCCTCCGCG
GCCCTCGGCG ACCCTGTCCA CGAGACGCAG CTGGTCCCGA CGTACGCCCC CGAGCCCGAC
GCGGACGAGA CCCAGGTCGT GGAGACCCGC TCCGAGCCCC TGCTCGGCGA CGACGTGCCC
GAGGACGCTC CCGACCACGA CGAGCAGCGC GAGGACGAGG CTCACGACGC GGTTCCCGGC
GAGGTCCACG ACGGCGAGGT TCACGACGAC GCGGTGTCGG ACGACGCCGT GCCTGACGAC
CTCCTGACCG AGGACGAGGC GTCTCACGTC GAGCCCGACC TCTCCGCCGA GCCCGAGAGC
GGAGGCCCTG CCGACCACGC GGCTCCTGCC GAGCCCGCAG CCTTCGCCGA GCCCGAGCCC
GAGCCCGCTC TCCGGCCCGA CGTCGTCGAG GACCTCGACG CGCCGACGTC CCCCGTGCCG
GTCACGGACC CGTCCGGTGT GGACGAGGCC CCGGTGAGCA CGCCGCCGTC CGGCTCGGCA
GCGATCGCCG CGGCCGCGCT GGCCTCGCCG ACCTTCGGCA CGCCTGCGCT GGCTGACGGT
GCGGAGAGGC GTGGGGAGAC CCCGCTCCAG CTGGACCGGA TGGACGCCCG TCCTGACGAG
CCGGTCGACG TGGTCCTCGC CCTCGGTGCG AACCTCGGCG ACGCGCAGGG CACGCTGCGC
CGTGCGGTGG CCGAGCTCGA CACCCTGACA GGTGTCGACG TGGTCGAGGT CGGCCCGCTG
GCGCGGACCG CCGCGGTCGG CGGCCCGGAG CAGCCGGACT TCCTCAACAC CGTGGTCATC
GTCCGGACCA CCCTGTCCCC GCGCGAGCTC CTGCACGGCT GCCAGTCGGT CGAGGCGGGC
AACGGCCGTG AGCGGGACGT CCGCTGGGGC CCGCGCACGC TCGACATCGA CATCGTGGTG
TTCGGCGACG TCATCGGCTC GGCGACCGAC CTCGAGCTCC CGCACCCGCG GGCCAACGAG
CGGGCCTTCG TGCTCGCCCC GTGGGCGCAC CTGGCTCCCG AGGCGCACCT TCCCGGTCTG
GGCGGTGGTC CGGTCGCCGC GCTCGCCGCG ACCGCGCACG ACCGCGAGGG CATCCGCTGG
CTCGCGCTCG ACTGGTTGCA CGACGCAGAG CTGCCCACCG CCGCGCAGAC GAGCCGCCCG
GCGGCCGTGG CGCCCGCGCT GACGGCGGTC CAGGTGGTCT CCCTCCCCGA CGGCGAGACG
ACCGAGGACC CCGCCACGAC GCAGGCACCC GCGGACACGG TGGAGCCCTC TGCGGCGCCG
GCCCTCGGCG ACCAGCAGCC GCACGCAGCC CAGCCCGAGG CCGAGACGGA CCACGACGTG
ACGCACCCGG AGACGACCGC GGTCGAGGCC GCGCAGGTCT GGACGCCAGA CGTCGAGCCG
CCGCGTGCCG AGACGCACCT CGACAGCCTG GAGCACATCG AGAGCCCGGA CGACACCGTC
GACGGCGTGC CTGCGGTCGA GGACCGCACG CTCTGA
 
Protein sequence
MSTLVQRSVL DASGFPLDQI QILGIAARGF HGVLESEREA GQDFSADVTL YLDTRAAARD 
DDLDETVNYA LVAQDVVDIL SGEPVDLIET VAEQIAAAVL DRPLVASVDV TVHKPQAPIP
VPFSDVTVTI NRDRLNVPVV TSPVAPALDE LPAEDLAESR ADLPLSVEEP RDPDEQASAG
LPVSALPAAA LPAAALPAVS FPSAGLAGAP VPSDGIPVAG SALPPATAPT ELPEAFEPVA
LRVDETESDV ATPTPSSSPT LDLPLGRLTA PVAARESDPA SYSTSELHLE SDLVHDEPVA
SDETEVDLET EPDVEPAAAD ETAAASDTAV ADDDLLPVDG DQTTTSAALV PPVDDSILEE
QARLSEQARR PEVFGLRPRT DAHLRPTTDD TDDALPAPGD DHGQPEPAAS EAVASEARVS
EPETPEPEPE TTEPGRTEPT EGSPSAGPQM GAAFFAAASA AVRNASRDRA PLSFEELLNP
SATGDQPAAP AATPASGTPA DEAHPSATGV TAAPAAGPAD APSPVAEAVQ AADAEPEPEV
EHGQSQQPTA PAPVQEPGDD HPLEQPAGQP QADETKTDGH ATPVLVEPTE EAPVWQPSSF
AFPPTGLSTP TEQAAPAAQA GLPESGQQPA PVDGDTSRFA PPVAQQPHGT LEDREPVDTL
EAQDPVESVP TLSEPEESAL ETTALLPPLD LDDESRTAPG VEDTGPDRTG VDDSVPDASA
ALGDPVHETQ LVPTYAPEPD ADETQVVETR SEPLLGDDVP EDAPDHDEQR EDEAHDAVPG
EVHDGEVHDD AVSDDAVPDD LLTEDEASHV EPDLSAEPES GGPADHAAPA EPAAFAEPEP
EPALRPDVVE DLDAPTSPVP VTDPSGVDEA PVSTPPSGSA AIAAAALASP TFGTPALADG
AERRGETPLQ LDRMDARPDE PVDVVLALGA NLGDAQGTLR RAVAELDTLT GVDVVEVGPL
ARTAAVGGPE QPDFLNTVVI VRTTLSPREL LHGCQSVEAG NGRERDVRWG PRTLDIDIVV
FGDVIGSATD LELPHPRANE RAFVLAPWAH LAPEAHLPGL GGGPVAALAA TAHDREGIRW
LALDWLHDAE LPTAAQTSRP AAVAPALTAV QVVSLPDGET TEDPATTQAP ADTVEPSAAP
ALGDQQPHAA QPEAETDHDV THPETTAVEA AQVWTPDVEP PRAETHLDSL EHIESPDDTV
DGVPAVEDRT L