Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_31480 |
Symbol | |
ID | 8634781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3502280 |
End bp | 3502999 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain |
Protein accession | YP_003315879 |
Protein GI | 269796424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00376265 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.556858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CCGAGGCACG TCTCGTCGTG GTCGACGACG AGCCGAACAT CCGTGAGCTG CTCGCGACCT CGTTGCGCTT CGCCGGCTTC GAGGTCTTCG CCGCCGAGGA CGGCATGAGC GCGCTCAAGC TCGTCCGCGA CACCGAGCCC GACCTCGTCG TGCTCGACGT GATGCTGCCC GACATGGACG GCTTCACCGT GACCCGTCGC ATGCGCGAGA AGGGCCAGCA CATGCCCGTG CTGTTCCTCA CCGCGCGCGA CGACACGCAG GACAAGATCA CCGGGCTGAC CGTGGGCGGC GACGACTACG TCACCAAGCC GTTCAGCCTC GAAGAGGTGG TCGCGCGGAT CCGCGCCGTG CTGCGCCGCA CCCACCCGAC CCCGGTCGAC GACGCGGTGC TGCGCTTCGC GGACCTCGAG CTCGACGACG ACTCGCACGA GGTCCGCCGT GCGGGACGGG TCGTCGACCT GTCCCCCACC GAGTTCAAGC TGCTGCGCTA CCTCATGCTC AACCCGGGCC GGGTGCTGTC GAAGGCGCAG ATCCTCGACC ACGTGTGGCA GTACGACTGG GGCGGCGACG CGAACATCGT CGAGTCCTAC ATCTCCTACC TGCGACGCAA GATCGACAAC GCGCCGCTCC CGGACGGCTC GACCCCCGAG CCGCTCATCG CGACCAAGCG AGGCGTCGGC TACCTGCTCC GCCAGCCGCC CAAGAGGTAG
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Protein sequence | MTEPEARLVV VDDEPNIREL LATSLRFAGF EVFAAEDGMS ALKLVRDTEP DLVVLDVMLP DMDGFTVTRR MREKGQHMPV LFLTARDDTQ DKITGLTVGG DDYVTKPFSL EEVVARIRAV LRRTHPTPVD DAVLRFADLE LDDDSHEVRR AGRVVDLSPT EFKLLRYLML NPGRVLSKAQ ILDHVWQYDW GGDANIVESY ISYLRRKIDN APLPDGSTPE PLIATKRGVG YLLRQPPKR
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