Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_31470 |
Symbol | |
ID | 8634780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3501632 |
End bp | 3502210 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003315878 |
Protein GI | 269796423 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00321692 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.396468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGGCT CAGAACAGCG CACCGCGCGC CCCACGTACC TGCTCGTCGA CGGCGAGAAC ATCGACGCCA CGCTCGGGAT GAACGTCCTG GGGCACCGCC CCGCCCCCGA GGAGCGCCCC CGCTGGGACC GCATCTCGGA GTTCGCGCAG ACGCTGTGGG GCCAGCCCGT CACACCGCTG TTCTTCCTCA ACGCCTCGTC CGGGCAGATG CCGATGCCCT TCGTCCAGGC GCTGCTCGCC ATGGGCTACC GGCCCATCCC GCTGGCCGGT GCGAGCCACG AGAAGGTCGT GGACATCGGT ATCCAGCGCA CCCTCGAGGC GATCAAGGAC GTCGACGGCG ACGTCCTCCT CGCCAGCCAC GACGGCGACT TCCTGCCGCA GGTCGAGGCG CTCCTCGACG GCGAGCGCCG CGTGGGGCTC ATGTGCTTCC GCGAGTTCGT CAACGGGCGC CTCAACGAGC TGAGCGCCCG CGGGCTCGAG TTCTTCGACC TCGAGGAGAC CGTCGGGGCC TTCACGACGC CGCTGCCGCG CGTGCGCATC ATCCCGATCG AGGAGTTCGA CCCGCTGCGC TACATCTGA
|
Protein sequence | MSGSEQRTAR PTYLLVDGEN IDATLGMNVL GHRPAPEERP RWDRISEFAQ TLWGQPVTPL FFLNASSGQM PMPFVQALLA MGYRPIPLAG ASHEKVVDIG IQRTLEAIKD VDGDVLLASH DGDFLPQVEA LLDGERRVGL MCFREFVNGR LNELSARGLE FFDLEETVGA FTTPLPRVRI IPIEEFDPLR YI
|
| |