Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_31040 |
Symbol | |
ID | 8634737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3456188 |
End bp | 3456946 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_003315835 |
Protein GI | 269796380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.567657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTCA GCCTCTCCCT CGGCGCGCTC GAGTCCCTCA TGCTCGTGGG CGTGCGCATG GTGGCGTTCC TCGTCGTCGC GCCGCCGTTC TCGCACCGCG GCATCCCCGC GACCGTCAAG GTCATGCTGG CGACCGGTCT CGCGCTCGCC GTCTCGCCGC GCGTGGAGAA CCTGGTCCCG GACAGCACCG GCGAGTACGT CGTGCTGCTC GTGGGGGAGG CCATCATCGG AGCCGGGCTG GGGTTCCTCG TGGCGGTCGT GTTCTCGGCC GTCCAGTCGG CGGGCGCGCT CATCGACCTC ATGGGCGGGT TCTCGCTGGC CCAGGGCTTC GACCCGATGA CCCAGGTCAA CGGCGCGCAG TTCGCCCGGC TCTACCAGCT GACCGCCGTG GTCATCCTCT TCGCCTCGAA CGGCTACCAG ATGGTCATCG GCGGGCTCGT CCGGACCTTC GACGCGCTCC CGCTCGGGTC CACCCTCGAC CTCGCCCGCC TCGGCGAGGC CCTCACGTCG AGCCTCACGG GCATGTTCCT CGCGACGCTG CAGATCGCCG GGCCGCTCGT GGTCGTGCTG TTCCTCGCCG ACGTCGGCCT CGGCCTGCTC ACCCGTGTGG CTCCCGCGCT CAACGCCTTC GCGCTCGGCT TCCCGCTGAA GATCTTGCTC ACGCTCAGCC TCGCGTCGCT CACCTACCTC GCGATGCCGC GGATCATCGA GTCCCTCACG GGCACGTCCC TCGAGTCGAT GCTGGGGGTC ACCTCGTGA
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Protein sequence | MTLSLSLGAL ESLMLVGVRM VAFLVVAPPF SHRGIPATVK VMLATGLALA VSPRVENLVP DSTGEYVVLL VGEAIIGAGL GFLVAVVFSA VQSAGALIDL MGGFSLAQGF DPMTQVNGAQ FARLYQLTAV VILFASNGYQ MVIGGLVRTF DALPLGSTLD LARLGEALTS SLTGMFLATL QIAGPLVVVL FLADVGLGLL TRVAPALNAF ALGFPLKILL TLSLASLTYL AMPRIIESLT GTSLESMLGV TS
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