| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_30920 |
|---|
| Symbol | |
|---|
| ID | 8634725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3438267 |
|---|
| End bp | 3440018 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_003315823 |
|---|
| Protein GI | 269796368 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA CGTCGACCAG GCCTGCACGC ACCACAGCCA GCACACCCGC GCCCCGCAGC
GGCACCGCGC CCCGTGACGG CGCGGCTGCC CAGCAGCGGC CAGCCAGCTC CTCCGCCCCC
GGGCGCCCCG GCGAGAAGCC CTCTGCCCGC GAGCCCCGCG CATCCCGTGC CCGGTGGTTC
TGGGACCGTC CCGTCGCCGT GAAGATCGGC ACGTCGCTCG TGGTCATGGG CGTCGTCTTC
GCCTCCGTCG GAGGCGTCGC GGCGCTCGCG CTCGGGCGCG CCGCCGACCA CCTCGACCAG
GTGAACACGC TCACCGGCGA GCTCCAGGGC GACCTCGGCG ACCTCCGCGC CGCGCAGGCC
ACGAGCCAGC TGCTCGTCCG CCGCGCGGCC GCAGCACCCG ACGACGCGCT GCGCACCCAG
CTCCTCACCT CCTCCGACTG GAACGACACG ACCGTCGAGC GCCTCATCGC CGACGTCGAG
ACCTTCGAGC AGTCCGGCAC CCAGCAGTGG CAGGACTTCG TCACCCGGTG GGGGGAGTGG
ACCGCGTACC GCGACGGCGT CGTGCTGCCC CTCGTCGAGG CCGGCGACGT CGACGGCGTC
GAGCAGGCCC TCGCGGCCGA CGTCGCCGCC GACCCCGACC GCGCCGGGCG CGCGCTGCTG
CTCGCGCAGG GCCAGATCGA CTTCCAGGTC GCCGAGGTGC TCCACGACGC CCAGGCCGAC
GTCTCCCGCA CCATCATCGT GCTCGGGGTG TCCTTCCTGG TCGGGGCAGG GCTCTCGGTG
ACGCTCGCGG TGCTCGTCGT GCGACGCATC ACGTCGGGCA TCCGGTCCGT CCAGGGTGCC
CTCGAGTCCC TCGCGACCGG TGACCTCACC CACGAGGTCG ACGTGCTCAG CCGCGACGAG
CTCGGGCAGA TGTCCCAGTC CTACGACCTC GCCGTGTCCA ACCTGCGCGG CGCCATGACC
GGCGTGGTGA GCACCGCGAC CGCTGTGGCC CAGAACGCCG AGGACCTCGG CGCCGCCAAC
ACCCAGGTGT CCGGCGGGGC AGAGGCGACG AGCGCGCAGG CGGCCGTCGC GACCGAGGCC
GCCGAGCTGG TCTCGCGCAC CATCCAGTCC GTCGCCGCCG GCGCGGAGCA GATGGGCGCG
TCGATCCGCG AGATCGCCGG CTCGGCCGAC GAGGCCGCGA AGGTCGCCGC GCAGGCGGTC
CAGGTCTCCG AGTCCACCGC CGAGTCGGTG CGGCTGCTCG GGGAGTCGTC CCAGGCCATC
GGCACCGTCG TCAAGGCGAT CACGAGCATC GCCGAGCAGA CCAACCTGCT GGCCCTCAAC
GCGACCATCG AGGCCGCGCG CGCCGGCGAG GCCGGCAAGG GCTTCGCGGT GGTCGCGCAC
GAGGTCAAGG AGCTCGCGGG GGAGTCGGGG CGCGCCGCCG AGGACGTCGC GCGCCGCATC
GCCGAGATCC AGTCGCAGAC CGGCTCGACC GTCACGGCCA TCTCCGAGAT CTCGGGGATC
ATCCGCACGA TCAGCGACTA CCAGATGACC ATCGCCTCGG CCGTCGAGGA GCAGACCGCG
ACGACCAACG AGATGAGCCG CGGCATCACT GAGGCTGCCG CGGGCGCCGG CGAGATCGCC
GTGCACATCG GCTCCGTCGC GGCCGTCGCC TCCCAGTCCT CCGACGTCGT GGCCCGCATG
GGCCAGACCG TCGACGAGCT CACGGCGGCC TCGGCCGACC TCCGTACCCA GACCGCGGCG
TTCGCGGTCT GA
|
|---|
| Protein sequence | MTTTSTRPAR TTASTPAPRS GTAPRDGAAA QQRPASSSAP GRPGEKPSAR EPRASRARWF
WDRPVAVKIG TSLVVMGVVF ASVGGVAALA LGRAADHLDQ VNTLTGELQG DLGDLRAAQA
TSQLLVRRAA AAPDDALRTQ LLTSSDWNDT TVERLIADVE TFEQSGTQQW QDFVTRWGEW
TAYRDGVVLP LVEAGDVDGV EQALAADVAA DPDRAGRALL LAQGQIDFQV AEVLHDAQAD
VSRTIIVLGV SFLVGAGLSV TLAVLVVRRI TSGIRSVQGA LESLATGDLT HEVDVLSRDE
LGQMSQSYDL AVSNLRGAMT GVVSTATAVA QNAEDLGAAN TQVSGGAEAT SAQAAVATEA
AELVSRTIQS VAAGAEQMGA SIREIAGSAD EAAKVAAQAV QVSESTAESV RLLGESSQAI
GTVVKAITSI AEQTNLLALN ATIEAARAGE AGKGFAVVAH EVKELAGESG RAAEDVARRI
AEIQSQTGST VTAISEISGI IRTISDYQMT IASAVEEQTA TTNEMSRGIT EAAAGAGEIA
VHIGSVAAVA SQSSDVVARM GQTVDELTAA SADLRTQTAA FAV
|
|---|
| |