Gene Sked_30720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30720 
Symbol 
ID8634706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3421546 
End bp3422607 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content73% 
IMG OID 
Productdaunorubicin resistance ABC transporter ATP-binding subunit 
Protein accessionYP_003315804 
Protein GI269796349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.933735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT ACGCGATCGA GGCGCACGGC CTCGTCAAGC ACTTCGGGTC CACCCGAGCG 
GTCGACGGCA TCGACCTCGA GGTCCCCGCC GGGACCGTCT ACGGCGTGCT GGGCCCCAAC
GGGGCAGGCA AGACCACCGC GGTGCGGATG CTCGCGACCC TGCTGCGGCC CGACGCCGGC
ACCGCCCGGA TCCTCGGCCA CGACATCCTC CGCGAGGCCG ACACCGTCCG CAGCCTCGTC
GGCCTCACCG GGCAGTACGC CTCGGTCGAC GAGGACCTCA CCGGCGCCGA GAACCTCATG
GTGCTCGCGC GCCTCTACGG GTTCTCCCGG CCCGCAGCCC GTCGGCGCGG CGCCGACCTT
CTCGAGGCCT TCGACCTCAC CGAGGCGGCC GGCAAGCAGG TCAAGACGTA CTCGGGCGGC
ATGCGGCGGC GCATCGACCT CGCCGCGAGC CTCGTGATGA GCCCCGCGGT GCTGTTCCTC
GACGAGCCCA CCACCGGCCT CGACCCGCGC AGCCGCAACG ACGTGTGGGA CATCGTCCGG
GTGCTCGTGG ACGACGGCGC CACGGTGCTG CTCACCACCC AGTACCTCGA GGAGGCAGAC
CAGCTGGCGA ACCGCATCGC CGTCGTCGAC CACGGGAAGG TCATCGCCGA GGGCACCGCC
ACGGAGCTCA AGAGCTCGGT GGGGTCGGGC TCGGTCCAGC TGCGCCTGGC CGACCCGTCA
CGCCGCGACG AGGCGGCGCG CATCGTCGCC GGCCTGCTCG GCGAGCCCGA CGCCGTCTCG
CTGTCCCCCG ACCCGGCGGC GCTCTCGGCA CGCATCGACA GCAGTGCCGA CGGCTCCGCA
CGCGCCCACC AGATCCTGCC GAGGCTGCAC GACGCGGGGA TCCACGTCCC CGAGTTCTCG
CTCGGCCAGC CGAGCCTCGA CGAGGTGTTC CTCGCGCTCA CGGGTCAGCC GACAGGCACA
GGTCAGCCGA CAGACACAGG GAAGCCGACA GACTCGACCC AGGGCACCGA GGCCGGGCCG
GGCTCCGCGG CCGGGCAGAC CACCGAGGAG GCCACCTCAT GA
 
Protein sequence
MSDYAIEAHG LVKHFGSTRA VDGIDLEVPA GTVYGVLGPN GAGKTTAVRM LATLLRPDAG 
TARILGHDIL READTVRSLV GLTGQYASVD EDLTGAENLM VLARLYGFSR PAARRRGADL
LEAFDLTEAA GKQVKTYSGG MRRRIDLAAS LVMSPAVLFL DEPTTGLDPR SRNDVWDIVR
VLVDDGATVL LTTQYLEEAD QLANRIAVVD HGKVIAEGTA TELKSSVGSG SVQLRLADPS
RRDEAARIVA GLLGEPDAVS LSPDPAALSA RIDSSADGSA RAHQILPRLH DAGIHVPEFS
LGQPSLDEVF LALTGQPTGT GQPTDTGKPT DSTQGTEAGP GSAAGQTTEE ATS