Gene Sked_30510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30510 
Symbol 
ID8634685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3397382 
End bp3398362 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003315785 
Protein GI269796330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.163783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCACGCACCG CCGCTCAGCC CGCCGTGCCG CACGGCTGGC AGCACCCCTG 
CTCGCCGTCG CGCTGCTCGC CGGCTGCTCG ACCGTCACCG ACGACGCCGA CGCGACCTCG
ACCAGCGCCG CCGCAGGTGA CGACACCGCC GCGCCCGACG ACACCGCCGC GACCCACAGC
GTCGAGCACG CGCGCGGCAC CACCGAGGTC CCGGCCGAGC CGCTGCGGGT CGTGGTCCTC
GAACCCGTGC AGCTCGACAC GGCGGTCGCA CTGGGTGCCG TCCCCGTCGG GGCAGCCGTG
CTCAACGAGG AGGCCGGGGT CCCGGCGTAC CTCGGCGAGG CCGCGGCGAA CATCGAGTCC
GTCGGCACCG TCACCGAGCC GAGCATCGAG AAGATCGCCG CGCTCGAGCC CGACCTCATC
CTCGGCACCG AGTCGCGACA CTCTGCGCTC TACGACCGCC TCGACGAGAT CGCGCCGACC
GTGTTCATGG CGACGCAGAC CGACCCGTGG ACCGAGAACG TCGAGCTCGT GGCCCGCGCC
CTCGGCGACG AGGCCGGGGC ACAGACCCTC CTCGACGCCT TCGAAGCGCG CTGCACGGAG
GTCGCCGAGG ACCACCAGAC CGCGGGCAAG ACCGCCCAGC TCATCCGCCC GCGCGACGGT
CTCCTGACGC TCTACGGGCC CACGTCCTTC GCGGGGAGCG TCCTCGAGTG CGCCGGCTTC
ACCACGCCCG AGCGCGACTG GGAAGAGTCC ATCTCCGTGG ACCTGTCCTA CGAGCGCGTC
TTCGAGGCCG AGGCCGACCT CGTGCTCGTC ACGACGACCG ACACGTCCGA CCAGAGCACC
CTGCCCGAGG TGCTCGCCAC GAACACCGAC GCGTTCCCGT CGCTGCACCT CGTGGACCAG
TCCTTCTGGA TCACCGGCGT CGGCCCGCTC GGCGGGATGA CCGTGCTCGA CGACCTCGAC
CGGCTGCTCG CAGAGCAGTA G
 
Protein sequence
MSTPTHRRSA RRAARLAAPL LAVALLAGCS TVTDDADATS TSAAAGDDTA APDDTAATHS 
VEHARGTTEV PAEPLRVVVL EPVQLDTAVA LGAVPVGAAV LNEEAGVPAY LGEAAANIES
VGTVTEPSIE KIAALEPDLI LGTESRHSAL YDRLDEIAPT VFMATQTDPW TENVELVARA
LGDEAGAQTL LDAFEARCTE VAEDHQTAGK TAQLIRPRDG LLTLYGPTSF AGSVLECAGF
TTPERDWEES ISVDLSYERV FEAEADLVLV TTTDTSDQST LPEVLATNTD AFPSLHLVDQ
SFWITGVGPL GGMTVLDDLD RLLAEQ