Gene Sked_30480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30480 
Symbol 
ID8634682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3392219 
End bp3393217 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003315782 
Protein GI269796327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.178307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGT CCCGCCTGCT GGCACTCCCC GCCGCGCTGC TCACCGCCGC GCTCACGCTC 
ACCGCGTGCG GCACCACCGA GCCCGCCGGC TCCGAGACCA CCGACGGGGC CCCCGCAGCC
TCCTCGGGCC CGGTCACCTA CACCGACGAG CGCGGCGAGC ACACCCTCGA CGCACCTGCC
ACCGCCGTCG TCTCGCTCGA GTGGGGCCTC ACCGAGAACC TCCTCGCCCT CGGCGCACCG
ATCGTCGGCC AGGCCGACGT CGCCGGCTAC AACACCTGGG ACACGTCCAT CGCCCTCGAC
GAGGACACCC CCGACGTCGG CACCCGCGGC GAGGCCAGCC TCGAGGCCAT CTCCGCCCTC
GAGCCCGACC TCATCGCCGT CACCACCGAC ACCACCGACG CCGTCGTCGA CCAGCTCGAG
GACATCGCGC CCGTCGTGGT GCTCCGCGGC TCGGACGGCA CCGACCCGAT CGGGTACATG
CGCAGCACCG TCGAGACCCT CGCCGCCGCG ACCGGCACCG ACGCCCGGGG CGAGGAGCTC
CTCGCGTCCT TCGACGCGAA GGTCGCCGAC GCCAAGACCA CCCTCGAGGA GGCGGGCGTC
GACGGCGCCG CCTTCACCAT GGCCGACGGC TGGATCACCA ACGGCACCGT CTCCGTCCGC
ATGTACACCG CAGGCTCGTT CCTCGGCGCC ATCGCCGACG AGCTGGGCCT CGAGAACGCC
TGGGCCGGCG AGGGCGACCC CGTCTACGGT CTCGCGCAGA CCGACATCGA GGGCCTCACC
GCGCTCTCCG ACACCCAGGA CCTCACCTTC CTCTACGCCG CGAGCGACAG CGAGGACGAC
CCCTTCGCCG ACGGCCTCGC CGGCAACGCC ATCTGGGAGC AGCTGCCCTT CGTGACCGCC
GGCGACGTGC ACCGCATCCC CGACGGCATC TGGATGTTCG GCGGCCCGGC CTCGGCCGAG
GCGTACGTCG ACGCCCTCGT CGCCGCGCTC ACCGCGTGA
 
Protein sequence
MRTSRLLALP AALLTAALTL TACGTTEPAG SETTDGAPAA SSGPVTYTDE RGEHTLDAPA 
TAVVSLEWGL TENLLALGAP IVGQADVAGY NTWDTSIALD EDTPDVGTRG EASLEAISAL
EPDLIAVTTD TTDAVVDQLE DIAPVVVLRG SDGTDPIGYM RSTVETLAAA TGTDARGEEL
LASFDAKVAD AKTTLEEAGV DGAAFTMADG WITNGTVSVR MYTAGSFLGA IADELGLENA
WAGEGDPVYG LAQTDIEGLT ALSDTQDLTF LYAASDSEDD PFADGLAGNA IWEQLPFVTA
GDVHRIPDGI WMFGGPASAE AYVDALVAAL TA