Gene Sked_30240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30240 
Symbol 
ID8634658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3361722 
End bp3362408 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID 
Productuncharacterized membrane-associated protein 
Protein accessionYP_003315758 
Protein GI269796303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.397546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCG CCCTCATCCC CTGGCTCGAC CCCGCGACCA TCATCCCGAG CATGGGGCCC 
TGGGCCCTGG TCGGGGTCTG CCTCATCATC TTCGCCGAGA CCGGTCTGCT GGTCGGCTTC
CTGCTCCCCG GCGACACCCT GCTGTTCTTC GCCGGCCTCC TCACCCACAC CGGTGTCATC
GGGATCAACA TCTGGTGGGT CGCCCTCGCG ATCGGCTTCT CCGCGTTCCT CGGCGGCGAG
GTCGGGTACC TCATCGGGCA CCGTCTCGGC CCGCGGGTGT TCGAGCGCAA GGAGTCGGGG
CTGTTCAGCA CCGCGAACGT CGCACGCACC AACGCGTTCT TCGAGCGCTT CGGCCCGATG
GCCGTCGTGC TCGCACGGTT CATCCCGGTG GTCCGCACCT TCGCCCCGGT CGCCGCGGGC
GTCGCCCACA TGAGCTACCG CCGCTACTCC CTCTACAACT TCGTCGGGGC GATCGTCTGG
GGCGTCGGTC TCACCATGCT CGGCTTCCTG CTCGGCGGGA TCCCGTGGGT GGCAGAGTTC
GCCGAGAAGT ACATCGACCT GGTCCTGATC GCGGCCGTCA CGCTCACCCT CGTGCCCACC
GCGTTCCACT ACGTGCGGTC CACCCGACGC GCCCGCCGGG CTGCGGCGGC AGGTCCTGCT
GTCGACCCGG AGATCACAGC CGTCTGA
 
Protein sequence
MHAALIPWLD PATIIPSMGP WALVGVCLII FAETGLLVGF LLPGDTLLFF AGLLTHTGVI 
GINIWWVALA IGFSAFLGGE VGYLIGHRLG PRVFERKESG LFSTANVART NAFFERFGPM
AVVLARFIPV VRTFAPVAAG VAHMSYRRYS LYNFVGAIVW GVGLTMLGFL LGGIPWVAEF
AEKYIDLVLI AAVTLTLVPT AFHYVRSTRR ARRAAAAGPA VDPEITAV