| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_30130 |
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| Symbol | |
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| ID | 8634647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 3351219 |
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| End bp | 3352730 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | gamma-aminobutyrate permease-like transporter |
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| Protein accession | YP_003315748 |
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| Protein GI | 269796293 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.362555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA ACCAGCAGCG CCAGCACGGA CCTGCGGACG CAGACGGACC CACCGGTGCC
GCCCGTGCAC AGGACCCGCA CGGAGACGGC AGCCCGCAGC TCGAGCGGGC GCTGAGCAAC
CGCCACCTGC AGCTCATCGC GATCGGCGGA GCGATCGGCA CCGGGCTCTT CATGGGCTCC
GGCAAGACCA TCTCGCTCGC CGGCCCGTCC GTGCTGCTGG TCTACGCGGT CATCGGCTTC
ATGCTGTTCT TCGTCATGCG TGCCCTCGGC GAGCTGCTGC TGTCGAACCT CGGCTACAAG
TCCTTCCGCG ACATCACCTC GGACGTCCTC GGACCCTGGG CCGGGTTCTT CACCGGGTGG
ACCTACTGGT TCTGCTGGAT CGTCACGGGG ATCGCCGACA TCGTCGCGAT CTCCGGGTAC
ATGGCCTTCT GGGCCCCCGA CCTCGCGCGC TGGATCCCGG CGCTCGCCAC GATCCTGCTG
CTGCTCGGGC TCAACCTCGT GGCCGTCCGG CTGTTCGGCG AGCTCGAGTT CTGGTTCGCG
ATCATCAAGA TCGTCGCGAT CGTCGCCCTC GTGGTCACCG GCCTGGTGCT CGTCGCGGTC
GCCTTCCAGT CCCCGGACGG CTCGCAGGCC ACGCTGTCGA ACCTCTACTC CGATGGCGGG
TTCTTCCCGC ACGGCGTCAG CGGCTTCCTC GCCGGGTTCC AGATCGCGCT CTTCGCCTTC
GTCGGCATCG AGCTGGTCGG CACCGCGGCC GCAGAGACCA AGGACCCCGA GAAGAACCTG
CCGCGCGCCA TCAACTCGAT CCCGATCCGG ATCGTGCTGT TCTACCTCGG CGCGCTCTTC
GTCATCATGG CCGTCACCCC GTGGCGGAAC ATCTCGCCGG ACGAGAGCCC CTTCGTCGCG
ATGTTCGCCC TCGCCGGTCT GCCCGCCGCG GCCGCGGTGG TCAACTTCGT CGTCCTCACC
TCGGCGGCCT CGTCGGCGAA CAGCGGGATC TTCTCGACCT CGCGCATGAT GTACGGGCTC
GCGCAGGAGG ACGAGGCGCC GCGCAGCTTC GGACGACTGT CGAAGAACAG CGTCCCCGCA
CGCGGGCTCA TCTTCTCGTG CGCGTGCCTC GTGCCCGGCG TCGCACTGCT CTACACGGGC
AAGAGCGTCG TCGCGGCCTT CACGCTCGTC ACGACCGTCT CCTCGGTGCT GTTCATGTTC
GTGTGGACCA TGATCCTCGT GAGCTACCTG CGGTACCGGC GCGAGCGACC TCAGGTGCAC
GAGGCGTCGA CCTTCAAGAT GCCCGGCGGC GTCGTGATGT GCTGGGTGGT GCTCGCGTTC
TTCGCCGCGA TGCTCGTCGT GCTGATGCTC GAGAAGGACA CCCGCGACGC GCTGCTCGTC
ACCCCGGTGT GGTTCGCGGT CCTCGGCGTC GCCTGGGCCG TCATGCGCCG TCGCGGGCAC
GGCGGTCGGC CCGCGGTGGC GCGTGCGGCT GCACCGGACG AGCACGGGGG AAGCCGGTCG
CGAGAGGCCT GA
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| Protein sequence | MSTNQQRQHG PADADGPTGA ARAQDPHGDG SPQLERALSN RHLQLIAIGG AIGTGLFMGS
GKTISLAGPS VLLVYAVIGF MLFFVMRALG ELLLSNLGYK SFRDITSDVL GPWAGFFTGW
TYWFCWIVTG IADIVAISGY MAFWAPDLAR WIPALATILL LLGLNLVAVR LFGELEFWFA
IIKIVAIVAL VVTGLVLVAV AFQSPDGSQA TLSNLYSDGG FFPHGVSGFL AGFQIALFAF
VGIELVGTAA AETKDPEKNL PRAINSIPIR IVLFYLGALF VIMAVTPWRN ISPDESPFVA
MFALAGLPAA AAVVNFVVLT SAASSANSGI FSTSRMMYGL AQEDEAPRSF GRLSKNSVPA
RGLIFSCACL VPGVALLYTG KSVVAAFTLV TTVSSVLFMF VWTMILVSYL RYRRERPQVH
EASTFKMPGG VVMCWVVLAF FAAMLVVLML EKDTRDALLV TPVWFAVLGV AWAVMRRRGH
GGRPAVARAA APDEHGGSRS REA
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