| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_29860 |
|---|
| Symbol | |
|---|
| ID | 8634620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3317393 |
|---|
| End bp | 3318109 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | LSU ribosomal protein L1P |
|---|
| Protein accession | YP_003315722 |
|---|
| Protein GI | 269796267 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGC GCAGCAAGGC ATATCGCACT GCGGCCGAGA AGATCGACCG CGACAACCTG
TACACCCCCC TCGAGGCCGT CCGCCTCGCG AAGGACACCT CGGTGACCAA GTGGGACGCG
ACCGTCGAGG TCGCCTTCCG CCTGGGCGTC GACCCTCGCA AGGCCGACCA GATGGTCCGT
GGGACCGTCA TCCTCCCGCA CGGCACCGGC AAGACCGCTC GCGTCCTGGT CTTCGCCACG
GGTGAGCGTG CCGAGCAGGC CCGCGCGGCC GGCGCCGACG TCGTCGGTGG CGACGAGCTC
ATCGACCAGG TCGCAGCCGG TTTCACCGAC TTCGACTCGG CCGTCGCGAC CCCTGACCTC
ATGGGCAAGG TCGGACGCCT CGGAAAGGTC CTCGGACCCC GTGGCCTCAT GCCGAACCCC
AAGACGGGCA CCGTGACCAT GGACGTCGCG AAGGCCGTCT CGGAGATCAA GGGCGGAAAG
ATCGAGTTCC GCGTCGACAA GCACTCGAAC CTCCACTTCA TCATCGGCAA GGTGTCGTTC
TCCGAGGAAG CCCTCGTGGA GAACTACGCA GCCGCGATCG AAGAGGTCCT CCGTCTGAAG
CCGTCCGCAT CCAAGGGCCG CTACATCTCG AAGGCCACCC TGACGACGAC GATGGGCCCC
GGCATCCCCG TGGACCAGTC GAAGACGACG AAGCTGCTCG GCGACGACGA GTCCTGA
|
|---|
| Protein sequence | MATRSKAYRT AAEKIDRDNL YTPLEAVRLA KDTSVTKWDA TVEVAFRLGV DPRKADQMVR
GTVILPHGTG KTARVLVFAT GERAEQARAA GADVVGGDEL IDQVAAGFTD FDSAVATPDL
MGKVGRLGKV LGPRGLMPNP KTGTVTMDVA KAVSEIKGGK IEFRVDKHSN LHFIIGKVSF
SEEALVENYA AAIEEVLRLK PSASKGRYIS KATLTTTMGP GIPVDQSKTT KLLGDDES
|
|---|
| |