| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_29710 |
|---|
| Symbol | |
|---|
| ID | 8634605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3298602 |
|---|
| End bp | 3299441 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | LSU ribosomal protein L2P |
|---|
| Protein accession | YP_003315707 |
|---|
| Protein GI | 269796252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.560922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCC GTAAGTACAA GCCGACGACG CCCGGACGCC GCGGCGCCAG CGTCGCCGAC
TTCGTCGAGA TCACGCGCTC GGAGCCGGAG AAGTCGCTGA TCCGCCCGCT CCACAAGACC
GGTGGCCGTA ACAGCTCCGG CCGTATCACC ACCCGTCACA AGGGTGGTGG CCACAAGCGT
GCGTACCGCG TCATCGACTT CCGTCGCCAC GACAAGGACG GCGTGCCCGC CAAGGTCGCT
CACATCGAGT ACGACCCGAA CCGGACCGCC CGCATCGCGC TGCTGCACTA CGCGGACGGC
GAGAAGCGCT ACATCATCGC CCCGAACAAG CTGCGTCAGG GTGACGCGAT CGAGAACGGC
GCCGGCGCTG ACATCAAGCC TGGCAACAAC CTGCCTCTTC GCAACATCCC GACCGGTACG
GTCATCCACG CCATCGAGCT CAAGCCCGGC GGCGGCGCGA AGATCGCACG TTCGGCCGGT
GTGTCGGTGC AGCTCGTCGC CAAGGACGGC AACTTCGCGC AGCTGCGCAT GCCGTCCGGC
GAGATCCGCA ACGTCGACCT GCGCTGCCGC GCGACGGTCG GCGAGGTGGG CAACGCCGAG
CAGTCGAACA TCAACTGGGG CAAGGCCGGC CGCATGCGCT GGAAGGGCAA GCGCCCGACC
GTCCGTGGTG TCGCCATGAA CCCGATCGAC CACCCGCACG GTGGTGGTGA AGGGAAGACC
TCCGGTGGTC GTCACCCTGT CAGCCCCTGG GGCCAGGCAG AGGGTCGCAC CCGTCGTCCC
AACAAGGCGA GCGACAAGCT CATCGTCCGT CGCCGTCGTA CCGGCAACAA GAAGCGTTGA
|
|---|
| Protein sequence | MGIRKYKPTT PGRRGASVAD FVEITRSEPE KSLIRPLHKT GGRNSSGRIT TRHKGGGHKR
AYRVIDFRRH DKDGVPAKVA HIEYDPNRTA RIALLHYADG EKRYIIAPNK LRQGDAIENG
AGADIKPGNN LPLRNIPTGT VIHAIELKPG GGAKIARSAG VSVQLVAKDG NFAQLRMPSG
EIRNVDLRCR ATVGEVGNAE QSNINWGKAG RMRWKGKRPT VRGVAMNPID HPHGGGEGKT
SGGRHPVSPW GQAEGRTRRP NKASDKLIVR RRRTGNKKR
|
|---|
| |