Gene Sked_29580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29580 
Symbol 
ID8634592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3293015 
End bp3293386 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content69% 
IMG OID 
ProductLSU ribosomal protein L18P 
Protein accessionYP_003315694 
Protein GI269796239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.100392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.753343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCA AGATCATGGG CAAGGGCAAG GCAGTCGCGC GTCAGCGCCG TCACCTGCGC 
CTGCGCAAGA AGATCTCAGG CACGGCTGCT CAGCCGCGTC TGGTGGTTAC CCGCTCCGCT
CGTCACATGA CCGCTCAGGT CGTCGACGAC ACGGTCGGCA AGACCGTCGC CTCGGCTTCG
ACCCTCGAGG CCGACCTGCG CGCCTTCGAC GGCGACAAGA CGGCCAAGGC CCGCAAGATC
GGCGAGCTCG TCGCCGAGCG TGCCAAGGCT GCCGGCGTCG AGGCAGTCGT GTTCGACCGC
GGGGGCAACA AGTACCACGG CCGAGTGGCA GCAGTCGCCG ACGGGGCCCG CGAAGGCGGT
CTGGCCCTGT GA
 
Protein sequence
MALKIMGKGK AVARQRRHLR LRKKISGTAA QPRLVVTRSA RHMTAQVVDD TVGKTVASAS 
TLEADLRAFD GDKTAKARKI GELVAERAKA AGVEAVVFDR GGNKYHGRVA AVADGAREGG
LAL