| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_28660 |
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| Symbol | |
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| ID | 8634500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 3204250 |
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| End bp | 3205161 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | 23S RNA-specific pseudouridylate synthase |
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| Protein accession | YP_003315602 |
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| Protein GI | 269796147 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.727795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGGACG GCCTCAACCC TGTCCGGCTC CAGCTGCCGC ACGGCGCCGA GGCCGCGACG
GTGCTCGCGT ACCTGGTCGC CCGCTTCCCC ACCGACGCGG AGCGGATGCG CGAGAAGGTC
GCTGCCGGCG AGGTGGTCGA CGAGATCGGC CGGTCGCTCG GTCCCGACGC CCCGTACGTC
GGCGGGACTC TCGTCTACCT GTACCGCGAC GCGGCACCGG AGCCACGGGT GCCCTTCGAG
ATCGACGTGC TGCACCACGA TGACGACCTG CTCGTCATCG ACAAGCCGCA CTTCCTCGCC
AGCACGCCCC GAGGGGCCTA CGTGGTCGAG TCTGCGGTCG TGCGGCTGCG GCGCGACCTG
GGGCTGCCCG AGATCAGCCC GGCGCACCGG CTGGACCGCA TCACCGCCGG GGTGCTGGTC
CTGACGACCC GACGCGAGGT CCGGGGTGCC TACCAGCAGC TCTTCGCGAG CCGCACGATC
CACAAGACCT ACGAGGCCGT GGCGCGTGTG GACCCGCGGC TCGACCTCCC GCGGACCGTC
CGCAGCCGCA TCGTCAAGGA GCACGGGACG CTGGTGGCCC AGGAGGTGCC GGGGGAGCCC
AACGCGGAGA GCCGCGTCAG CCTCGCCGAG GTGGCCCCGG GTGCGGGGGA CGGTGGCGAG
GCCCTCGGTC GCTACGTGCT CGAGCCGCAC ACCGGCAAGA CGCACCAGCT GCGGCTGCAC
ATGGCCTCGC TCGGCCTGCC GATCCTCAAC GACAACTTCT ACCCGCGGTT CTACGACGTG
GCGCCCGACG ACTACTCGGC GCCGCTGCAG CTGCTCGCGC GGTCCATCAG CTTCACCGAC
CCGCTGAGCG GCGAGCCCCG GACCTTCACC AGCCGACGCG CCCTGGGACG CTGGCCCGGC
ACGGCTGCGT GA
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| Protein sequence | MRDGLNPVRL QLPHGAEAAT VLAYLVARFP TDAERMREKV AAGEVVDEIG RSLGPDAPYV
GGTLVYLYRD AAPEPRVPFE IDVLHHDDDL LVIDKPHFLA STPRGAYVVE SAVVRLRRDL
GLPEISPAHR LDRITAGVLV LTTRREVRGA YQQLFASRTI HKTYEAVARV DPRLDLPRTV
RSRIVKEHGT LVAQEVPGEP NAESRVSLAE VAPGAGDGGE ALGRYVLEPH TGKTHQLRLH
MASLGLPILN DNFYPRFYDV APDDYSAPLQ LLARSISFTD PLSGEPRTFT SRRALGRWPG
TAA
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