| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_28580 |
|---|
| Symbol | |
|---|
| ID | 8634492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3197408 |
|---|
| End bp | 3197680 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | phosphotransferase system HPr (HPr) family protein |
|---|
| Protein accession | YP_003315594 |
|---|
| Protein GI | 269796139 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00406387 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0448712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCAC GCACCGTCGC CGTCGCCTCC CGCTCCGGCC TGCACGCCCG TCCCGCGTCC
CTGTTCACGC AGGCGGCGGC CGACAGCGGC CTCGAGGTGA CGATCGCGCA CGCCGGCGGC
GAGCCCGTCG ACGCGGCGAG CATCCTGTTC GTCATGTCCC TCGGCGTCCC GCACGGCGAC
GAGGTCACCC TCGCCGCCGA GGGTGACGAC GCGGACCGCG TCCTCGACGA GCTCGTCACG
CTGCTCGCGA CGGACCTCGA CGAGGAGCAC TGA
|
|---|
| Protein sequence | MPSRTVAVAS RSGLHARPAS LFTQAAADSG LEVTIAHAGG EPVDAASILF VMSLGVPHGD
EVTLAAEGDD ADRVLDELVT LLATDLDEEH
|
|---|
| |