| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_27710 |
|---|
| Symbol | |
|---|
| ID | 8634405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3088256 |
|---|
| End bp | 3089185 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | ABC-type sugar transport system, permease component |
|---|
| Protein accession | YP_003315507 |
|---|
| Protein GI | 269796052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.935575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.331014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCA CGACCACACC GGCGGCGGTC ACGGCACAGA CCGCGCGCGC ACCGCGCGAC
GAGCCCGAGG GCCGCGGCCG CACGCTGCGG GCCTTCAAGG CCTCCCCCGC GACCTACGCC
GTCCTGCTAA TCGTCTCCGC GATCCTCTTC GTGCCCTTCG TGTTCGTCGT GTCGATCGCC
CTGTCGAGCG ACCAGACCGT CAACACCAAC AGCTTCACGG TGATCCCTCG CGAGTTCGAG
TGGGGCAACT TCGTCAGGGT CTTCACCTCG GACCTGCCCA TGGGCCGGTT CGTCGTGAAC
TCGGCCGTCA TCGCGTTCTT CGCGGTGATC GGGCAGGTGA TCTCGAGCTC CCTCGTCGGC
TACGCCTTCG CCAGGCTGCG AGCGCCGGGG AAGAACGCCG TGTTCCTCGT GGTCCTCGCG
ACCATGATGA TCCCCGCGCA GATCACGATG ATCCCGCAGT TCATCCTCTT CAAAGAGCTC
GGCTGGGTGA ACACGTTCCT GCCGCTCATC GTCCCGAACT TCTTCTCGAA CGCCTTCAAC
ATCTTCCTCG TGCGGCAGTT CGTCTCCCGG ATGTCGTCGG AGGTCGACGA GGCCGCGATG
ATGGACGGGC TCGGGTTCTT CGGCATCTAC CGCCGGATGA TCCTGCCCAT GATGTTCCCG
ATCCTCGTCG CGATCGGTAT CTTCACGCTG ACCGCCACGT GGGGTGACTT CATGGGGCCG
CTGATCTACC TCAACGACGA GTCCAAGATG CCGCTCGCCC TCGGTGTGCA GTACATCGCC
AGCACCGGGC AGGCGCTGCA GGCACCACCG TGGAACTTCG TCATGGTCGG GTCGCTCCTG
CTCACCGTGC CGATGATCTG CGTCTACTAC CTCGGCCAGA AGTACCTCTA CGAGATGAAC
CTCAGCGGCG GAAGCGCAGG TGTGAAGTGA
|
|---|
| Protein sequence | MAITTTPAAV TAQTARAPRD EPEGRGRTLR AFKASPATYA VLLIVSAILF VPFVFVVSIA
LSSDQTVNTN SFTVIPREFE WGNFVRVFTS DLPMGRFVVN SAVIAFFAVI GQVISSSLVG
YAFARLRAPG KNAVFLVVLA TMMIPAQITM IPQFILFKEL GWVNTFLPLI VPNFFSNAFN
IFLVRQFVSR MSSEVDEAAM MDGLGFFGIY RRMILPMMFP ILVAIGIFTL TATWGDFMGP
LIYLNDESKM PLALGVQYIA STGQALQAPP WNFVMVGSLL LTVPMICVYY LGQKYLYEMN
LSGGSAGVK
|
|---|
| |