Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_27190 |
Symbol | |
ID | 8634353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3026909 |
End bp | 3027562 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | 2-keto-3-deoxy-phosphogluconate aldolase |
Protein accession | YP_003315457 |
Protein GI | 269796002 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.159677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.618471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGA AGACCATCAC CGAGTCCCTC GCTGCGGCAC GGATCGTCCC CGTCGTCGTC ATCGACAACC CCGACCACGC CGTGCCGCTC GGACGGGCCC TGCTCGCCGG CGGCCTCGAC GTCATCGAGG TCACCTACCG CACCGCAGGC GCACAGGCCG CCCTCACCGC CCTCAAGGAG CTCCCCGAGC TCGTCGTCGG GGCCGGCACC GTCGTCCGCC CCGAGCAGGT CGACAGCGCC GTCGCCGCCG GAGCGCAGTT CCTCGTCTCG CCCGGCCTCA GCGCCGCCGT CGTCGAGCGC GCCCAGGCCG TCGGCGTCCC GATCCTCCCC GGCGTCGCCA CCCCGAGCGA CATCATGGCG GCCCTCGCCC TCGGCCTCGA CATCGTCAAG CTCTTCCCCG CGGCCACCCT CGGCGGCCCC TCCGCCATCA AGGCCTTCTC CGCGCCGTTC CCCGGCCTGC GCTTCGTCCC CACCGGCGGC ATCTCCGCCG CCACCGTCGG CGACTACCTC GCCCTCCCGT CCGTGATCGC CGCCGGCGGC TCCTGGATGG TCGAGCGCAG CCTCATCGAG GCCGAGGACT GGGCCGAGAT CACCCGCCGC ACCGCCGAGG CCGTCGAGCT CGCCGGCCAG ACCCCCGCCA CGACCGGAGC CTGA
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Protein sequence | MSEKTITESL AAARIVPVVV IDNPDHAVPL GRALLAGGLD VIEVTYRTAG AQAALTALKE LPELVVGAGT VVRPEQVDSA VAAGAQFLVS PGLSAAVVER AQAVGVPILP GVATPSDIMA ALALGLDIVK LFPAATLGGP SAIKAFSAPF PGLRFVPTGG ISAATVGDYL ALPSVIAAGG SWMVERSLIE AEDWAEITRR TAEAVELAGQ TPATTGA
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