Gene Sked_27190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27190 
Symbol 
ID8634353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3026909 
End bp3027562 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content74% 
IMG OID 
Product2-keto-3-deoxy-phosphogluconate aldolase 
Protein accessionYP_003315457 
Protein GI269796002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.159677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.618471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGA AGACCATCAC CGAGTCCCTC GCTGCGGCAC GGATCGTCCC CGTCGTCGTC 
ATCGACAACC CCGACCACGC CGTGCCGCTC GGACGGGCCC TGCTCGCCGG CGGCCTCGAC
GTCATCGAGG TCACCTACCG CACCGCAGGC GCACAGGCCG CCCTCACCGC CCTCAAGGAG
CTCCCCGAGC TCGTCGTCGG GGCCGGCACC GTCGTCCGCC CCGAGCAGGT CGACAGCGCC
GTCGCCGCCG GAGCGCAGTT CCTCGTCTCG CCCGGCCTCA GCGCCGCCGT CGTCGAGCGC
GCCCAGGCCG TCGGCGTCCC GATCCTCCCC GGCGTCGCCA CCCCGAGCGA CATCATGGCG
GCCCTCGCCC TCGGCCTCGA CATCGTCAAG CTCTTCCCCG CGGCCACCCT CGGCGGCCCC
TCCGCCATCA AGGCCTTCTC CGCGCCGTTC CCCGGCCTGC GCTTCGTCCC CACCGGCGGC
ATCTCCGCCG CCACCGTCGG CGACTACCTC GCCCTCCCGT CCGTGATCGC CGCCGGCGGC
TCCTGGATGG TCGAGCGCAG CCTCATCGAG GCCGAGGACT GGGCCGAGAT CACCCGCCGC
ACCGCCGAGG CCGTCGAGCT CGCCGGCCAG ACCCCCGCCA CGACCGGAGC CTGA
 
Protein sequence
MSEKTITESL AAARIVPVVV IDNPDHAVPL GRALLAGGLD VIEVTYRTAG AQAALTALKE 
LPELVVGAGT VVRPEQVDSA VAAGAQFLVS PGLSAAVVER AQAVGVPILP GVATPSDIMA
ALALGLDIVK LFPAATLGGP SAIKAFSAPF PGLRFVPTGG ISAATVGDYL ALPSVIAAGG
SWMVERSLIE AEDWAEITRR TAEAVELAGQ TPATTGA