| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_26710 |
|---|
| Symbol | |
|---|
| ID | 8634305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2982147 |
|---|
| End bp | 2983499 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003315409 |
|---|
| Protein GI | 269795954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.376533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGACCA CCAAGACGCC GACCATGAAG ACGCCGCCCC TGAAGACAGA GACGAGCCAG
ACCCGCACGA CCGCCGCTCC GCCGCCGCCC CAGGCGCCGG CCACGCGCCG GGCGGCCGCC
CGCGGCGTGC TCTCGACGAG CCACCTCACC GCCGCGCTCA CCATGCAGCC GGCCGACGCG
ACGGTCGCCG CCGCGATCCG TGCCGGCCTG GCCGTCGGTG GTGCTCTCGT CGTCGGGCAC
CTCTCCGGGC TCCCTGGCGC CGCGGGCTTC GCCGCACTCG GCGCGCTCGC CTCGGTCTAC
GTCCGGTGGG CCCCCTACCG GCGCCGCGCG GAGCTGGTCG GTCTCGCGGG CCTCATGATC
ACCGGCTCGG TGCTCGTCGC CTCGCTCACG GCCCTCGCCG GGTGGCCGGC GCCGGTCGAG
ATGCTCGTCG TGTCGCTCGT GGCCGCCGGG ACCAGCCTGC TCACCCTCGC GGTGCGCACC
GGGCCGCCGG GACCCGTCAT GGCGATCTTC GCGGCCGGGG CTGCGGTCGC CGGGGACCCG
AGCCTCGCCG ACGTCGGCGT CCGGACCGGC GCCACGCTCG GCGGCGCCGT CCTCGCGTGG
CTGGTCTGCA TGTCGGGCTA CGTCCTGCGC CCCAGCGAGC CTGCCGCACT GGCCGTGCGA
CGCGCCCTGC GGTCCGAGCC GCTCGACCCG GTGCGCCTGT CACAGGCCCG CGAGGTGCTC
GCGGACGACC TCAGCCACCG ACGCACCGCC CCTGCCGCCC GCGACCTCGC GCTCCTGCTC
GCCGAGGTCG AGAGCGGCGA GAGCGCGTCG GTGACCGTGG ACTCGCACCT CGCCGTCCCG
GAGCGCCGCA CGCTCCTCGA CGTCGCCCGA GCGACCGTGC GCTCGGGCGA GGTGACGGTG
CCCGTCCTGC GGATCGGCGC CGGCGCGCTG GTGGCCTCCC TCGCGGCGCT CGCCCTCGGC
TGGGGGCACC CGGCGTGGGC CGCCGTCGGC GCGGCGGCCG CACTCCAGGG ACGGCACGTC
CACACCAACA CCCCGCGCGC GCTGCAGCGT GCCGTCGGCA CGGCGGTCGG CGCGCTCCTC
GCCTGGCCGC TGCTCGAGGC GCACCTGGGG TTCTGGGCGG TCGTCGCGGT GGTCGTGGCG
CTCCAGGTGG TCACCGAGCT GCTGGTGCTG CGCAACTACG CGGTCGCGAT GCTCGTCATC
ACGCCGATGG CACTGCTGAT GACGTCGCTC GGGGCTCCGG CGGACGGGTC GCTCGCGCTC
GACCGAGCAC TGACGACCGT CCTCGGGGCG GCCGTCGGGG TGCTCATGAC GGTCGTGGTC
CACGACCGCT GGGAGCAGGC ACCGGGGCAC TAG
|
|---|
| Protein sequence | MPTTKTPTMK TPPLKTETSQ TRTTAAPPPP QAPATRRAAA RGVLSTSHLT AALTMQPADA
TVAAAIRAGL AVGGALVVGH LSGLPGAAGF AALGALASVY VRWAPYRRRA ELVGLAGLMI
TGSVLVASLT ALAGWPAPVE MLVVSLVAAG TSLLTLAVRT GPPGPVMAIF AAGAAVAGDP
SLADVGVRTG ATLGGAVLAW LVCMSGYVLR PSEPAALAVR RALRSEPLDP VRLSQAREVL
ADDLSHRRTA PAARDLALLL AEVESGESAS VTVDSHLAVP ERRTLLDVAR ATVRSGEVTV
PVLRIGAGAL VASLAALALG WGHPAWAAVG AAAALQGRHV HTNTPRALQR AVGTAVGALL
AWPLLEAHLG FWAVVAVVVA LQVVTELLVL RNYAVAMLVI TPMALLMTSL GAPADGSLAL
DRALTTVLGA AVGVLMTVVV HDRWEQAPGH
|
|---|
| |