| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_25500 |
|---|
| Symbol | |
|---|
| ID | 8634184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2831548 |
|---|
| End bp | 2833329 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| Protein accession | YP_003315288 |
|---|
| Protein GI | 269795833 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.196991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.172822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCTCA TCTCCAAGGT CCTCATCGCC AACCGCGGCG AGATCGCCGT CCGCATCGCT
CGTGCCTGTG CGGACGCCTC GATCTCCTCC GTCGCCGTCT ACGCCGACTC GGACCGCGAA
GCCCTGCACG TCCGCCTCGC CGACGAGGCG TACTCCCTCG ACGGCATGCG TGCGGCCGAC
ACCTACCTCG ACATCGCGAA GCTGCTCGAC GTGGCCCGCC GGTCCGGCGC CGACGCCGTG
CACCCCGGCT ACGGCTTCCT CGCCGAGAAC GCCGAGTTCG CGCGCGCCGT GATCGCGGCT
GGCCTCGTGT GGATCGGCCC GCCGCCGTCG GCGATCGACT CGCTCGGCGA CAAGGTCAGC
GCACGGCACA TCGCGCAGCG CGCCGGTGCG CCGCTCGTCC CCGGGACCGC AGACCCGGTC
GCCGACGCGA CCGAGGTGCA CGCCTTCGCG GCCGAGCACG GCCTGCCCAT CGCCATCAAG
GCGGCGTTCG GCGGCGGCGG GCGCGGCATG CGCGTCGCTC GCACCGCGGA CGAGATCGAC
GCGATGTACG ACGCCGCCGT CCGCGAGGCC GTCGGGGCCT TCGGCCGCGG CGAGTGCTTC
GTCGAGCGGT ACCTCGACAC CCCGCGTCAC GTCGAGACCC AGTGCCTCGC CGACGAGCAC
GGCACCGTCG TGGTCGTCTC GACCCGCGAC TGCTCGCTCC AGCGCCGCCA CCAGAAGCTC
GTGGAGGAGG CGCCTGCGCC CTACCTCTCC CAGGAGCAGG TCGACGCCCT CTACCGCTCG
TCCGAGGCGA TCCTGCGCGA GGCCGGGTAC GTCGGCGCCG GGACCTGCGA GTTCCTCGTG
GGCGCCGACG GCACGCTGTC CTTCCTCGAG GTCAACACGC GCCTGCAGGT CGAGCACCCG
GTGAGCGAAG AGGTCACCGG CATCGACCTC GTCCGCGAGC AGCTGCGCAT CGCCGCCGGC
GAGCCCCTCG GCTACTCCTC CGTCGAGGTC CGCGGGCACT CGATCGAGTT CCGCATCAAC
GGCGAGGACC CGGCGGCCGG CTTCCTCCCC TCCCCCGGCA AGATCACCGG GCTGCGGCTG
CCGACCGGCC CGGGCGTCCG CGTCGACAGC GGCGTCGTCG AGGGCGACAC GATCTCGGGG
GCCTTCGACT CCCTGCTCGC CAAGGTGATC ATCACCGGTG CCACCCGCAC CCAGGCCGTC
GAGCGCGCGC GTCGTGCGCT CCGCGAGCTG GAGATCGAGG GCATCCCGAC CGTCGTGCCG
TTCCACCGCG CGGTGCTCGA CGCCGAGGCC TTCGTCCCCG TGGGCGACGA GCCCTTCACC
GTCCACACCC GCTGGATCGA GACCGAGTTC GCCGACGAGT GCGCAGCTCT CGGCGGCACG
ACTCCCACCC CGGCACCCGA CGAGGACGAC GAGCCCCCGG CAGCGACCGA GCGCGTGGTC
GTCGAGGTCG GCGGCAAGCG CCTCGAGGTC GTCATCCCCG CTGGTCTCGG CATCAGCGGA
CGGGCACGCG CCGGTGCGGC GCGTCGTCCT GCACGCAGAG CCGCGAGCAA GGCCAGCAGC
GGGTCGAGCA CCACGCTCGC CTCCCCGATG CAGGGCACCA TCGTCAAGGT CGCGGTCGAG
GAGGGCGCCG TCGTCGCCGA GGGCGACCTC GTCGTCGTCC TCGAGGCGAT GAAGATGGAG
CAGCCGCTCC TCGCCCACCG CGCCGGGACC GTCACGGGGC TGAGCGCCTC GGTCGGCGGC
GGCGTGAGCG CCGGCACGGC GATCTGCGAG ATCATCGGCT GA
|
|---|
| Protein sequence | MPLISKVLIA NRGEIAVRIA RACADASISS VAVYADSDRE ALHVRLADEA YSLDGMRAAD
TYLDIAKLLD VARRSGADAV HPGYGFLAEN AEFARAVIAA GLVWIGPPPS AIDSLGDKVS
ARHIAQRAGA PLVPGTADPV ADATEVHAFA AEHGLPIAIK AAFGGGGRGM RVARTADEID
AMYDAAVREA VGAFGRGECF VERYLDTPRH VETQCLADEH GTVVVVSTRD CSLQRRHQKL
VEEAPAPYLS QEQVDALYRS SEAILREAGY VGAGTCEFLV GADGTLSFLE VNTRLQVEHP
VSEEVTGIDL VREQLRIAAG EPLGYSSVEV RGHSIEFRIN GEDPAAGFLP SPGKITGLRL
PTGPGVRVDS GVVEGDTISG AFDSLLAKVI ITGATRTQAV ERARRALREL EIEGIPTVVP
FHRAVLDAEA FVPVGDEPFT VHTRWIETEF ADECAALGGT TPTPAPDEDD EPPAATERVV
VEVGGKRLEV VIPAGLGISG RARAGAARRP ARRAASKASS GSSTTLASPM QGTIVKVAVE
EGAVVAEGDL VVVLEAMKME QPLLAHRAGT VTGLSASVGG GVSAGTAICE IIG
|
|---|
| |