Gene Sked_25350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25350 
Symbol 
ID8634169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2817306 
End bp2818004 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative intracellular protease/amidase 
Protein accessionYP_003315273 
Protein GI269795818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.779211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG TCCTGTTCGT CGTCAGTGCA GCGCAGGGGT GGACCCTCGC CGACGGCACC 
GTCCACCCCA CCGGCTTCTG GGCCGAGGAG CTCGCCGAGC CGCACCGCCT CTTCACCGAG
GCAGGCTGGG ACATCACCAT CGCGACGCCG GGGGCTGTGA AGCCGACCGT GGACGCGGGG
AGCCTCGCCC CTCAGGCTGC GGGCGGCGAG GACCGTGCTG CCGAGCTCGA GGCTTACCTC
GCGTCGATCG ACGACCGGCT CGCGGCGGTC GTCGACGTCG CGTCGGTGCG GGCGGCCGAC
TTCGACGCCG TCTTCTACCC GGGCGGGCAC GCCCCGATGG AGGACCTCGC GGTCGACACG
ACCTCGGGAG CACTCATGAC CGCGGCGCTC GACGAGGGCA TCCCGCTCGC CGTGCTGTGC
CACGCCCCGG CCGCCCTGCT CGCCGCCCGG CGTCAGGACG GCTCGTGGCC CTTCGCTGGC
TACCGGATGA CGTCCTTCAC CGACGAGGAG GAGCGCATCG GCGGACTCGC CGACAAGGCC
CGCTGGCTCG TCGAGACCGA GCTGGTCGGC CGTGGCGCCG AGTTCGTCGG CGGCGCGCCG
TTCGAGCCTC ACGTCGAGCA GGACCGCGGG CTCCTGACGG GTCAGAACCC GGCGTCGTCA
GAGCGCCTCG CCCGTGCCGT CCTGGACTCC GTCGGGTAG
 
Protein sequence
MSSVLFVVSA AQGWTLADGT VHPTGFWAEE LAEPHRLFTE AGWDITIATP GAVKPTVDAG 
SLAPQAAGGE DRAAELEAYL ASIDDRLAAV VDVASVRAAD FDAVFYPGGH APMEDLAVDT
TSGALMTAAL DEGIPLAVLC HAPAALLAAR RQDGSWPFAG YRMTSFTDEE ERIGGLADKA
RWLVETELVG RGAEFVGGAP FEPHVEQDRG LLTGQNPASS ERLARAVLDS VG