Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_25350 |
Symbol | |
ID | 8634169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2817306 |
End bp | 2818004 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | putative intracellular protease/amidase |
Protein accession | YP_003315273 |
Protein GI | 269795818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.779211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCG TCCTGTTCGT CGTCAGTGCA GCGCAGGGGT GGACCCTCGC CGACGGCACC GTCCACCCCA CCGGCTTCTG GGCCGAGGAG CTCGCCGAGC CGCACCGCCT CTTCACCGAG GCAGGCTGGG ACATCACCAT CGCGACGCCG GGGGCTGTGA AGCCGACCGT GGACGCGGGG AGCCTCGCCC CTCAGGCTGC GGGCGGCGAG GACCGTGCTG CCGAGCTCGA GGCTTACCTC GCGTCGATCG ACGACCGGCT CGCGGCGGTC GTCGACGTCG CGTCGGTGCG GGCGGCCGAC TTCGACGCCG TCTTCTACCC GGGCGGGCAC GCCCCGATGG AGGACCTCGC GGTCGACACG ACCTCGGGAG CACTCATGAC CGCGGCGCTC GACGAGGGCA TCCCGCTCGC CGTGCTGTGC CACGCCCCGG CCGCCCTGCT CGCCGCCCGG CGTCAGGACG GCTCGTGGCC CTTCGCTGGC TACCGGATGA CGTCCTTCAC CGACGAGGAG GAGCGCATCG GCGGACTCGC CGACAAGGCC CGCTGGCTCG TCGAGACCGA GCTGGTCGGC CGTGGCGCCG AGTTCGTCGG CGGCGCGCCG TTCGAGCCTC ACGTCGAGCA GGACCGCGGG CTCCTGACGG GTCAGAACCC GGCGTCGTCA GAGCGCCTCG CCCGTGCCGT CCTGGACTCC GTCGGGTAG
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Protein sequence | MSSVLFVVSA AQGWTLADGT VHPTGFWAEE LAEPHRLFTE AGWDITIATP GAVKPTVDAG SLAPQAAGGE DRAAELEAYL ASIDDRLAAV VDVASVRAAD FDAVFYPGGH APMEDLAVDT TSGALMTAAL DEGIPLAVLC HAPAALLAAR RQDGSWPFAG YRMTSFTDEE ERIGGLADKA RWLVETELVG RGAEFVGGAP FEPHVEQDRG LLTGQNPASS ERLARAVLDS VG
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