Gene Sked_24360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24360 
Symbol 
ID8634071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2718006 
End bp2719289 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content67% 
IMG OID 
ProductATP-dependent Clp protease ATP-binding subunit ClpX 
Protein accessionYP_003315184 
Protein GI269795729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.924686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACGCA TCGGTGACGG CGCAGACCTG CTCAAGTGCT CCTTCTGCGG GAAGTCCCAG 
AAGCAGGTCA AGAAGCTCAT CGCAGGCCCA GGGGTGTACA TCTGCGACGA GTGCATCGAC
CTCTGCAACG AGATCATCGA GGAAGAGCTC ACCGAGGCGG CCGAGGTCGG CATGGTCGAG
CTCCCCAAGC CGCGGGCGAT CTTCGACTTC CTCGAGCAGT ACATCATCGG CCAGGAGGGC
GCGAAGCGCT CGCTCGCCGT GGCGGTCTAC AACCACTACA AGCGGATCCA GGCGGGCGAG
GGCGCCCGCT CGGTCGGCGA GGACGCGTCC CAGGTCGACA TCGCCAAGTC CAACATCCTG
CTCATCGGGC CGACCGGCTG CGGCAAGACG TACCTGGCCC AGACGCTCGC GAAGATGCTC
AACGTGCCCT TCGCGATCGC GGACGCCACG GCGCTCACCG AGGCCGGGTA CGTGGGCGAG
GACGTCGAGA ACATCCTGCT CAAGCTCATC CAGGCCGCGG ACTACGACGT CAAGAAGGCC
GAGACGGGCA TCATCTACAT CGACGAGGTC GACAAGATCG CCCGCAAGTC GGAGAACCCG
TCGATCACCC GTGACGTCTC GGGCGAGGGC GTCCAGCAAG CGCTGCTGAA GATCCTCGAG
GGGACCACCG CGTCGGTGCC CCCGCAGGGC GGTCGCAAGC ACCCGCACCA GGAGTTCATC
CAGATCGACA CGACGAACGT GCTGTTCATC GTCGCCGGTG CCTTCGCGGG GCTCGACGAG
ATCATCTCCT CGCGCGCCGG CAAGCACGGC ATCGGCTTCG GTGCCCCGCT GCACACCGCG
GACGCGGCGG ACGCCTTCGG CGACGTGATG CCCGAGGACC TCCTGAAGTT CGGTCTGATC
CCCGAGTTCA TCGGTCGCGT GCCCGTCATC ACGACGGTGA CCCCGCTCGA CCAGACCTCC
CTCGTGCGCA TCCTCACGGA GCCGCGCAAC GCGCTCGTCA AGCAGTACCA GCGGATGTTC
GAGATCGACG GGGTCGAGCT CGAGTTCACC GACGACGCCG TCGCCGCGAT CGCCGACCAG
GCGCTGCTGC GCGGCACAGG CGCTCGTGGT CTGCGCGCCA TCATGGAGGA GGTCCTCCAG
CAGGTGATGT TCGAGGTGCC GAGCCGCGAC GACGTCGAGC GTGTGGTCGT CACGGGTGAG
GCCGTCCTCG AGAACGTCTA CCCAACCCTG GTCCCGCGTG CCGCACGGGG TGGCAAGAGC
GCTCCTCGCG AGAAGAGCGC GTGA
 
Protein sequence
MTRIGDGADL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL TEAAEVGMVE 
LPKPRAIFDF LEQYIIGQEG AKRSLAVAVY NHYKRIQAGE GARSVGEDAS QVDIAKSNIL
LIGPTGCGKT YLAQTLAKML NVPFAIADAT ALTEAGYVGE DVENILLKLI QAADYDVKKA
ETGIIYIDEV DKIARKSENP SITRDVSGEG VQQALLKILE GTTASVPPQG GRKHPHQEFI
QIDTTNVLFI VAGAFAGLDE IISSRAGKHG IGFGAPLHTA DAADAFGDVM PEDLLKFGLI
PEFIGRVPVI TTVTPLDQTS LVRILTEPRN ALVKQYQRMF EIDGVELEFT DDAVAAIADQ
ALLRGTGARG LRAIMEEVLQ QVMFEVPSRD DVERVVVTGE AVLENVYPTL VPRAARGGKS
APREKSA