Gene Sked_24330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24330 
Symbol 
ID8634068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2715226 
End bp2716047 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content69% 
IMG OID 
Productamino acid ABC transporter ATP-binding protein 
Protein accessionYP_003315181 
Protein GI269795726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0478381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CACCCACCAC CGCGGCCGCA GCCCCTGTCG TCACGGTCCG CGACCTGCAC 
AAGAGCTTCG GCTCGAACGC CGTCCTGCGC GGCATCGACC TCGAGGTCAC GCCGGGCGAG
GTCGTCTGCG TGATCGGCCC CTCCGGCTCG GGCAAGTCCA CGCTCCTGCG CTGCGTGAAC
CAGCTGGAGA GCGCGACGTC CGGGACCGTC ACGGTGCTGG GCGCCGAGAT CACCGACCCG
GACATCAACA TCGACGTCGT GCGCCAGCAC GTCGGCATGG TGTTCCAGCA GTTCAACCTC
TTCACCCACC AGACCGTCCT GGAGAACTGC ACCGTCGCCC AGCGCAAGGT GCTCAAGCGG
TCCAAGAAGA AGGCGACGGA GGTCGCGCTC GAGAACCTCG CCCGCGTCGG CCTCGCCGAC
CGAGGCGACT CGCACCCCAC CCAGCTCTCG GGTGGGCAGC AGCAGCGCGT CGCGATCGCC
CGTGCACTGA GCATGAACCC CTCGCTCATG CTCTTCGACG AGCCCACCTC CGCCCTCGAC
CCCGAGCTCG TCGGCGACGT GCTCACCGTC ATGCGGGACC TCGCCGAGCA GGGCATGACC
ATGATCGTGG TCACCCACGA GATGGCCTTC GCCCGCGAGG TCGCCGACCG TGTCGTCTTC
ATGGACGGCG GCGTGGTGGT CGAGTCCGGT CCGCCCGAGC AGGTCATCGG TGCACCGCGC
GAGGCACGCA CTCGCGCCTT CCTCGACCGG GTGCTCAACC CCACGCACAG CGGCACAGGA
ACAGCTCCTG ACGCGAGCCC GGAGACCACG GGCACGGTCT GA
 
Protein sequence
MTTAPTTAAA APVVTVRDLH KSFGSNAVLR GIDLEVTPGE VVCVIGPSGS GKSTLLRCVN 
QLESATSGTV TVLGAEITDP DINIDVVRQH VGMVFQQFNL FTHQTVLENC TVAQRKVLKR
SKKKATEVAL ENLARVGLAD RGDSHPTQLS GGQQQRVAIA RALSMNPSLM LFDEPTSALD
PELVGDVLTV MRDLAEQGMT MIVVTHEMAF AREVADRVVF MDGGVVVESG PPEQVIGAPR
EARTRAFLDR VLNPTHSGTG TAPDASPETT GTV