Gene Sked_23980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23980 
Symbol 
ID8634033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2669314 
End bp2670333 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC-type cobalamin/Fe3+-siderophore transport system, ATPase component 
Protein accessionYP_003315146 
Protein GI269795691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.862389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGG CGGAGGGCGG TGCGACCGGA GTGGAGGGCG GTGCGACCGG GGTGGAGGGC 
GGTGCGACCA GGGCGGAGAA CGGCGCGACC GGAGTGGAGG GCGGTGCGAC CGGGGCGGAG
AACGGCGCGA CCCGGGCGAG GACGACGGAC CGCGAGGGCG GGCTGAACGG GAAGGGCGGG
CTGGCTGGGA AGGGCGAGCT AGCTGGGGAG GGCGAGCTAG CTGGGGAGGG CGAGCTGGCT
GGGAAGGCCG GGCTGCGGGC GTCGAGGATG ACGTGGTCCG TCGACGGGCG GACGATCGTG
GACGGCGTCG ACTGCACCGC GCCCGCGGGC GCCCTGACCG GACTCGTCGG TCCGAACGGG
TCGGGGAAGT CGACCCTGCT GCGCCTGCTC ACGGGGGTCC TGGGCGCAGA CCGTGGCGAG
GTCGACTTCG CCGGCTCAGA CCTGCTGGGC CTGCGGCGCC GGGAGCGCGC CCGCCAGCTC
GCGGTCGTCG AGCAGGACGC GTCGGCCGAG CTCCCGCTCA CCGTGCGCGA CGCCGTGCTG
CTCGGACGGA TCCCCCACAG GTCGCTGCTG GCGGGCGACA GTGCCGCCGA CCACGCGATC
GCCGACGAGG CGCTGGCCCG GACCGGGATG AGCCACTTCG CCGACCGGAC TCTCTCGACG
CTGTCCGGGG GCGAGCGGCA GCGGGTGCAC ATGGCCCGAG CCCTCGCGCA GCGACCCCGC
CTGCTCGTGC TCGACGAGCC GACCAACCAC CTCGACATCA GTGCCCAGCT CGAGACCGTC
GCCCTCCTCC GAGAGCTGGC CGACGAGGGC GTCACCGTGC TGGCGGCGCT GCACGACCTC
TCGCTCGCGG CCAGCGTGTG CGACCACGTG GTCGTGCTCG GCGGCGGCCG TGTGGTGGCT
GCGGGCCCGG TCGGCGAGGT GCTCGTGCCC GAGGTGCTCG ACGCGGTCTA CGGCGTGCGG
TGCACGGTGC TGACACACCC GGAGACGGGG AGACCGGTGC TGTCGTTCGC GCTGGCGTGA
 
Protein sequence
MTGAEGGATG VEGGATGVEG GATRAENGAT GVEGGATGAE NGATRARTTD REGGLNGKGG 
LAGKGELAGE GELAGEGELA GKAGLRASRM TWSVDGRTIV DGVDCTAPAG ALTGLVGPNG
SGKSTLLRLL TGVLGADRGE VDFAGSDLLG LRRRERARQL AVVEQDASAE LPLTVRDAVL
LGRIPHRSLL AGDSAADHAI ADEALARTGM SHFADRTLST LSGGERQRVH MARALAQRPR
LLVLDEPTNH LDISAQLETV ALLRELADEG VTVLAALHDL SLAASVCDHV VVLGGGRVVA
AGPVGEVLVP EVLDAVYGVR CTVLTHPETG RPVLSFALA