Gene Sked_23890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23890 
Symbol 
ID8634024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2657400 
End bp2658215 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content74% 
IMG OID 
Productdihydroxyacetone kinase, phosphoprotein-dependent, L subunit 
Protein accessionYP_003315137 
Protein GI269795682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0484883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.421775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCA GTGCGTCGGT GGCCCGCGCG CAGGACGAGA CGGACCAGCA CCACCAGGTG 
CGACCCCAGG TCGGCACCGG AGCAGTCGAG AGAGAGCGTG AGGTTGGCAT GACCCTGGAC
GTGGCGTGGG CACAGCGGTG GGCGCGCGAG AGCGCAGCAG CGATCGCGGC AGCCCGGGAC
GAGCTCGTCG AGCTGGACCG TCAGATCGGC GACGGCGACC ACGGGGAGAA CCTCAACCGC
GGCTTCCAGG CGGTCGTGGC CAAGGTCGAC GCGGCCGACC AGCACCCCGA GCTCGTCTCG
GACGTGCTCA GGACGGTCGC GACGACCCTC ATGTCGTCCG TCGGCGGGGC GTCGGGACCG
CTCTACGGGA CGGCCTTCCT CCGGGCCGCG AAGGTCAGCG GGCTCGCCAC CCTCGACGCG
CACGCCGTCG TCGCGCTCCT CGAGGGGGCG CTCGAGGGCA TCACGGCACG CGGCAAGGCC
GCACCCGGCG AGAAGACGAT GGTCGACGCC TGGGGTCCCG CCGTCGACGC GGCGGTCGAC
GCGGCGGACG CCGGCGCGTC CCCGGTCGAG GTCCTGCAGG CCGCCGCCCG CGCGGCGTCC
GTGGGCGCGA GCCAGACGTC GTCCCTCGTG GCGACCAAGG GACGCGCGTC CTACCTCGGA
GAGCGCAGCA TCGGGCACGA GGACCCGGGC GCCGCGTCGT CAGCCCTGAT CCTCCAGGCC
GCGGTCGACG CCGCGGTCGG CACCGCGTCC GAGAGCACGC CCGACAGCAC GACCGGCAGA
CCGGCCGACG TGCCTGTGAC GGGAGACGAG GCATGA
 
Protein sequence
MTGSASVARA QDETDQHHQV RPQVGTGAVE REREVGMTLD VAWAQRWARE SAAAIAAARD 
ELVELDRQIG DGDHGENLNR GFQAVVAKVD AADQHPELVS DVLRTVATTL MSSVGGASGP
LYGTAFLRAA KVSGLATLDA HAVVALLEGA LEGITARGKA APGEKTMVDA WGPAVDAAVD
AADAGASPVE VLQAAARAAS VGASQTSSLV ATKGRASYLG ERSIGHEDPG AASSALILQA
AVDAAVGTAS ESTPDSTTGR PADVPVTGDE A