Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_23520 |
Symbol | |
ID | 8633987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2619441 |
End bp | 2620574 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_003315101 |
Protein GI | 269795646 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0200205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAG CACCTCCGCC CGTCCTCGCC CCGCGACGAC CCACCCGCAA GATCAAGGTG GGCAAGGTGG ACGTCGGCGG CGACGCCCCG GTGAGCGTGC AGTCCATGTG CACCACGCCG ACCACCGACA TCAACGCGAC CCTCCAGCAG ATCGCGGAGC TGACGGCCTC GGGCTGCGAC ATCGTGCGTG TCGCGGTGCC GAGCCAGGAC GACGCCCTCG CGCTCCCGGC GATCGCCAGG AAGTCGCAGA TCCCCGTGAT CGCGGACATC CACTTCCAGC CCAAGTACGT CTACGCGGCG ATCGACGCCG GCTGTGCCGC GGTGCGCGTG AACCCGGGCA ACATCCGCAA GTTCGACGAC CAGGTCAAGC AGATCGCGAA CGCCGCCCGT GACGCGGGCG TCTCGATCCG TATCGGCGTC AACGCCGGGT CGCTCGACCC GCGGATCATG GCCAAGTACG GCAAGGCGAC TCCCGAGGCG CTCGTCGAGT CGGCCGTCTG GGAGGCGTCG CTCTTCGAGG AGCACGACTT CCACGACTTC AAGATCTCGG TCAAGCACAA CGACCCCGTG GTCATGGTGC GCGCCTACGA GCTGCTCTCG CAGGCCGGCG ACTGGCCGCT GCACCTCGGT GTCACCGAGG CAGGTCCGGC CTTCCAGGGC ACCATCAAGT CCGCGACCGC CTTCGGCGCG CTGCTCTCGC AGGGCATCGG CGACACGATC CGCGTCTCGC TGTCCGCCCC GCCGGTCGAG GAGGTCAAGG TCGGCATCCA GATCCTCCAG TCGCTCAACC TCCGGCCCCG CAAGCTCGAG ATCGTCTCGT GCCCGTCGTG CGGGCGCGCC CAGGTCGACG TGTACACGCT CGCCGAGAAG GTCACCGCCG GTCTCGAGGG CCTCGAGGTC CCGCTCCGCG TGGCCGTCAT GGGCTGCGTC GTGAACGGCC CCGGCGAGGC TCGCGAGGCC GACCTGGGCG TGGCCTCGGG CAACGGCAAG GGACAGATCT TCGTCAAGGG CGAGGTCGTC AAGACCGTCC CCGAGGCGCT GATCGTCGAG ACGCTCATCG AAGAGGCCAT GCGCATCGCC GAGACCATGG AGCGCCCCGC CGAGGGCGGC GCCCCGGTCG TCTCGGTCGG CTGA
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Protein sequence | MPEAPPPVLA PRRPTRKIKV GKVDVGGDAP VSVQSMCTTP TTDINATLQQ IAELTASGCD IVRVAVPSQD DALALPAIAR KSQIPVIADI HFQPKYVYAA IDAGCAAVRV NPGNIRKFDD QVKQIANAAR DAGVSIRIGV NAGSLDPRIM AKYGKATPEA LVESAVWEAS LFEEHDFHDF KISVKHNDPV VMVRAYELLS QAGDWPLHLG VTEAGPAFQG TIKSATAFGA LLSQGIGDTI RVSLSAPPVE EVKVGIQILQ SLNLRPRKLE IVSCPSCGRA QVDVYTLAEK VTAGLEGLEV PLRVAVMGCV VNGPGEAREA DLGVASGNGK GQIFVKGEVV KTVPEALIVE TLIEEAMRIA ETMERPAEGG APVVSVG
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