Gene Sked_22940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22940 
Symbol 
ID8633929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2550344 
End bp2551282 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content71% 
IMG OID 
Productuncharacterized protein (ATP-grasp superfamily) 
Protein accessionYP_003315043 
Protein GI269795588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.15902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC CCCAGGAGCT CTACACGATC GACGACGCCG TCGAGTCCGC CCTCCGGCTC 
TCGCCGGACG AGGCGGGGAC CGGACCGGTC CTGGTCAACG CCCTGCGCGG GTTCGTCGAC
GCGGGCCACG TCGGGCAGGT CGCCCTCGAG CACATCCTCG ACCTCGGCGA GACCACCCGC
CTGGTGACCT TCGACGCCGA CCAGCTGGTC GACTACCGAT CGAAGCGGCC GACGATCGTC
TTCGACACCC AGCGCTGGAC GGAGTACTCC GGGCCGAGCA TCGCGATCGA CGTGGCACGA
GACCGCGAGG GCACCACCTT CCTCGTGCTC CACGGCAACG AGCCGGACGT CCAGTGGGAG
CGGTTCGTCG AGGCGGTCCT CTCCCTCGTC GACAGGTTCC GCGTCTCGCT GACGGTGGGC
ACCTACGGCA TCCCGATGGG CATCCCGCAC ACCCGGCTGC TCTCGGCCAC CCCGCACGCG
TCGCGCGACG AGCTGATCCC CGACGCCAGC CCCTGGTTCG GCCGCGTCAC GGTCCCGGCG
ACCGCGGCGA ACCTGCTCGA GCTCCGCCTC TCGGAGCGCG GGCACGACAC CGTGGGCTAC
GCCGTGCACG TCCCGCACTA CCTCGCGCAG TCCACGTACC CGCCCGCCGC CCTCGTGGCG
CTCGACAAGC TCGAGTCCGC GACCGGGCTC GACCTCGACC TCGAAGGACT CGAGGAGTCG
GCGACCGAGG CCCGCGCTGA GGTGGTCCGT CAGGTCGCAG AGTCGCCCGA GATCGCCGAG
GTGGTCCGTG GGCTCGAGGA GCAGTACGAC GCCTTCACGC TCTCGGCCGA GCGCCAGAGC
CTGCTCGCCG ACACCGCGGA GATCCCCACG GCAGACGAGA TCGGCGAGGA GCTCGAGCGC
TTCCTGGCGC AGCAGGGCCC GGACGGCCAG TCCTCCTAG
 
Protein sequence
MLDPQELYTI DDAVESALRL SPDEAGTGPV LVNALRGFVD AGHVGQVALE HILDLGETTR 
LVTFDADQLV DYRSKRPTIV FDTQRWTEYS GPSIAIDVAR DREGTTFLVL HGNEPDVQWE
RFVEAVLSLV DRFRVSLTVG TYGIPMGIPH TRLLSATPHA SRDELIPDAS PWFGRVTVPA
TAANLLELRL SERGHDTVGY AVHVPHYLAQ STYPPAALVA LDKLESATGL DLDLEGLEES
ATEARAEVVR QVAESPEIAE VVRGLEEQYD AFTLSAERQS LLADTAEIPT ADEIGEELER
FLAQQGPDGQ SS