Gene Sked_21690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21690 
Symbol 
ID8633804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2416707 
End bp2417996 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content71% 
IMG OID 
ProductSPFH domain, Band 7 family protein 
Protein accessionYP_003314923 
Protein GI269795468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.389538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATG GCAACAACGG CCAGATCATC GGCCTGGTCA TCGCAGCGCT CATCGCGCTG 
TTCTTCATCA TCGCCCTGGC ACGTGCTGTC CGGGTCGTCC CGCAGACCGC CTCGCTCATC
GTCGAGCGCC TCGGGCGCTA CTCGCGCACC ATGGACGCCG GTCTGCACTT CCTCATCCCG
TTCATCGACC GCGTGCGCGC CGGCGTCGAC CTGCGCGAGC AGGTCGTGTC GTTCCCGCCG
CAGCCGGTGA TCACCTCCGA CAACCTCGTC GTGAGCATCG ACACCGTCCT GTACTTCCAG
GTGACCGACC CGAAGTCGGC CGTCTACGAG ATCGCGAACT ACATCACGGC GATCGAGCAG
CTCACCGTCA CCACGCTCCG TAACGTCATC GGGTCCATGG ACCTCGAGCA GACCCTCACC
AGCCGCGACC AGATCAACGG CCAGCTGCGT GGCGTCCTCG ACGAGGCGAC CGGCCGCTGG
GGCATCCGCG TCAACCGTGT CGAGCTCAAG TCGATCGACC CGCCCCAGTC CATCCAGGGC
TCGATGGAGC AGCAGATGCG CGCCGAGCGT GACCGTCGCG CCGCGATCCT CACGGCCGAG
GGCTTCAAGC AGTCGCAGAT CCTCACCGCC GAGGGTGAGA AGCAGGCCGC GATCCTCCGC
GCCGAGGGTG GCGCCCAGGC CGCGATCCTC ACCGCCGAGG GTGAGGCGCG TGCCATCCTC
CAGGTCTTCG ACGCGATCCA CGAGGGTGAC GCGTCGCCGG AGCTGCTCGC CTACCAGTAC
CTGCAGATGC TCCCGCAGAT CGCCAACGGC ACCTCGTCGA AGATGTGGAT CGTCCCGACC
GAGTTCACGG CGGCCCTCGG GTCGATCACC AAGGGCTTCG GCGGAGACTC CGGCGACGGT
GACCACGGTG GTGGCTCGCA CGGTGGCGGA GACGGCGACG GGTCCAGCCC GCGCCCACGT
CGTGAGCGTG CGACCAACCC CCGGACCTCG GCCCTCGAGG ACCCGACGCA GGCCCTGGCC
GAGGCACGTC GCCTCGCCGA GGCGGCGACC GCCGACGCGA CGAGCGCCGG CACGCACTCG
GGGTCCCCGA CGGACCCGTC CCGGTCCGCG GGCCAGCAGC CCTCCGGGTC GCACGGCTCC
GCACCGACGG CGCCGCGCAC CCTCGGCTCC GAGGGCGGCG GGGCGCGGTT CGCCCCGCCC
GCGCCGGACG CGTTCGAGAA GCCGGCGACG CCGCCCGCCC CGCCCACGCC GCCGACGGCC
CCAGGGCAGG GGCAGCCGCC GCAGCAGTAG
 
Protein sequence
MNDGNNGQII GLVIAALIAL FFIIALARAV RVVPQTASLI VERLGRYSRT MDAGLHFLIP 
FIDRVRAGVD LREQVVSFPP QPVITSDNLV VSIDTVLYFQ VTDPKSAVYE IANYITAIEQ
LTVTTLRNVI GSMDLEQTLT SRDQINGQLR GVLDEATGRW GIRVNRVELK SIDPPQSIQG
SMEQQMRAER DRRAAILTAE GFKQSQILTA EGEKQAAILR AEGGAQAAIL TAEGEARAIL
QVFDAIHEGD ASPELLAYQY LQMLPQIANG TSSKMWIVPT EFTAALGSIT KGFGGDSGDG
DHGGGSHGGG DGDGSSPRPR RERATNPRTS ALEDPTQALA EARRLAEAAT ADATSAGTHS
GSPTDPSRSA GQQPSGSHGS APTAPRTLGS EGGGARFAPP APDAFEKPAT PPAPPTPPTA
PGQGQPPQQ