Gene Sked_21340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21340 
Symbol 
ID8633769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2384741 
End bp2385271 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content72% 
IMG OID 
Productphospholipid-binding protein, PBP family 
Protein accessionYP_003314888 
Protein GI269795433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0437018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.157291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA GCCGCGCGAT CGCACCCGAG CCCTACTCCC TCCTCCCCGC CGTCCCGTCC 
TTCTCGCTCA CCAGCGAGGA CGTCACCGAG GGCGCCCCCC TCGCCGACGA GTTCTCCGCT
GGTGGCGGCA GCACGTCTCC GCACCTGACC TGGTCCGGCT TCCCCGAGGC GACCCAGTCG
TTCCTGGTGA GCATGTTCGA CCCCGACGCC CCGGTCCCCT CCGGCTGGTG GCACTGGAAC
GTCGTCGACG TGCCCCTCGA GGTGACCGAG CTCGCCCAGG GCGACGGGTC GAGCGACCTC
ATGCTGCCCG GCGCTGCCTT CCACGTGCGC AACGACGGCG GCGAGTTCGA CTACCTCGGC
GCGGCCCCGC CCCAGGGCGA CCGCCCGCAC CGCTACGTGT TCGCCGTGCA CGCCCTCGAC
GTCGACACCC TCGACCTCGA CCCCGAGGTC AGCCCCGCCG TGGTGCACTT CACGGCCGTG
TTCCACACGA TCGCGCGGGC CACGCTCACC GCCACGTTCC AGCTGGGATA G
 
Protein sequence
MDLSRAIAPE PYSLLPAVPS FSLTSEDVTE GAPLADEFSA GGGSTSPHLT WSGFPEATQS 
FLVSMFDPDA PVPSGWWHWN VVDVPLEVTE LAQGDGSSDL MLPGAAFHVR NDGGEFDYLG
AAPPQGDRPH RYVFAVHALD VDTLDLDPEV SPAVVHFTAV FHTIARATLT ATFQLG