Gene Sked_21200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21200 
Symbol 
ID8633755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2366107 
End bp2366469 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content77% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003314874 
Protein GI269795419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0814821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACGA TCGACCCTGA CGACACCGCT CCCCCGTCCG AGCAGATCCG CACCCAGGTG 
CTCGCCGCCG TGCGGTCCGG CGACCTCGCG CCGGGCGCGC GGCTGCCCCC GGTGCGGACG
CTGGCCACCG AGCTCGGCGT CGCGGCGAAC ACCGTCGCCA AGGCGTACCG CGCGCTCGAG
CACGACGAGG TCGTCGAGAC CCGCGGTCGC AACGGCACCG TGGTGTCGCC GCACGGGGAC
CCGGGCGAGC GCCTCGCCCA GGCTGCGGCG GAGGCCTACC GGGCCCGCAC CGCTGAGCTG
GGGCTCGCCC CGGCCCAGGC GCTCGCCATC GTCACGGCGG CGCTGTCCGG CGGCTCGCGC
TAG
 
Protein sequence
MFTIDPDDTA PPSEQIRTQV LAAVRSGDLA PGARLPPVRT LATELGVAAN TVAKAYRALE 
HDEVVETRGR NGTVVSPHGD PGERLAQAAA EAYRARTAEL GLAPAQALAI VTAALSGGSR