Gene Sked_20640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20640 
Symbol 
ID8633699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2301367 
End bp2302086 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type branched-chain amino acid transport systems, ATPase component 
Protein accessionYP_003314820 
Protein GI269795365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.171574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.883119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTGC TTGAGATCAC CGACATGACC GTCTCCTACG GCCGCATCGA GGCCATCCGG 
GACGTGTCGA TCACGGTCGA GACCGGCGAG CTGGTCACCC TCATCGGTGC CAACGGCGCG
GGGAAGACCA CGACCATGCG CGCCGTGTCT GGGGTCCGGC CGCTCGCGCG CGGGCGCATC
GTCTTCGACG GGCAGGACGT CACCCGCATG AAGCCCCACC TGCGGGTCGC GGCGGGGATC
ATCCAGGCCC CGGAGGGCCG GGGCGTGTTC GCCGGGATGA CCGTCATGGA GAACCTCGAG
ATGGGGTGCT TCGCGCGGCC CTTCGCGTCC AAGGCCGAGC ACGACGAGAC GGTCGAGCGG
GTGTTCACGT TCTTCCCGCG GCTCCTCGAG CGCCGCACCC AGCTCGGCGG GACCATGTCC
GGCGGCGAGC AGCAGATGCT CGCGATCGGC CGTGCGCTCA TGGCCCGCCC GCGCGTGCTG
CTGCTCGACG AGCCCTCGAT GGGCCTGGCG CCGATGATCA TCCAGCAGAT CTTCCGGATC
ATCTCGGAGA TCAACGCCCA GGGCACCACC GTGCTGCTCG TCGAGCAGAA CGCGCAGCAG
GCGCTGTCCC GGTCAGACCG CGCCTACGTC CTCGAGACCG GGTCGGTCGT CCGGACCGGC
GAGGGCAAGG CGCTCCTCGC CGACCCGGCG ATCAAGGAGG CCTACCTCGG CGTGGGCTGA
 
Protein sequence
MPLLEITDMT VSYGRIEAIR DVSITVETGE LVTLIGANGA GKTTTMRAVS GVRPLARGRI 
VFDGQDVTRM KPHLRVAAGI IQAPEGRGVF AGMTVMENLE MGCFARPFAS KAEHDETVER
VFTFFPRLLE RRTQLGGTMS GGEQQMLAIG RALMARPRVL LLDEPSMGLA PMIIQQIFRI
ISEINAQGTT VLLVEQNAQQ ALSRSDRAYV LETGSVVRTG EGKALLADPA IKEAYLGVG