| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_20580 |
|---|
| Symbol | |
|---|
| ID | 8633693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2293416 |
|---|
| End bp | 2294621 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase, FAD-containing subunit |
|---|
| Protein accession | YP_003314814 |
|---|
| Protein GI | 269795359 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.990825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.761376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC CCGAGCACCA CGACGTCGTC ATCGTCGGCG GCGGCAACGC AGGACTGTCC
CTGGCCGGTC GCCTGCGCCG CGACGGAGCC CAGGACGTCG TGGTGGTCGA GCCGCGGCAC
GAGCACCACT ACCGCCCGCT GCTGTCCTAC GTGGCAGGAG GGCAGGCGAC CCTCGACGAC
CTGCGCCGAC CGCAGCAGGA CGTGCTCCCC GACGGCGTGC GCTGGGTGCG TGACTCGGTC
GCCTCGGTGG ACCCCGAGCG GTCGGTCGTG GTGCTCGCCG GGGGAGGGGA GCTCCACTAC
ACCGACCTCG CGCTGTGCCC AGGCTCCCAG GTGGACTGGG ACGCGATCCC CGGCTCCGAG
GCAGCGGTCC GGACGCCCTA CGCGGCGACC AGCTACCTGC CGGCCTCGGC CGTCGACACG
TGGGAGATGC TGTCGACGCT CACCGCCGGG CGTGCCGTCT TCGTCATCTC GGACAGGCAC
GTGCCCTGCG CACCCGTCGG GCTCAAGCCG CTCTTCCTCG CCCTGGACCA CTGGGAGGAC
ACCGGCGTGC GGGACAGCAT CGAGGTCGAG CTGCTCGTCG AGAGCGACCG TCTCGTCGAC
CTCGAGAGCG CCGACGAGCG CCTGCGGCAG GCCCTCGAGG AGCGGGACGT GCGGGTCTCG
CTCGCCACCA CCGTCACCTC CGTCGACGCC CAGACCCGGC ACCTCGTCGC CGAGCAGCGC
GACGTGGCAC CCGGGCGCAA CCCCCTCACC CTCGGCTACG ACGCGCTGTA CGTCGCACCG
CCGCACCGCG CACCCGCGTG GGTGGCGCAG AGCGGCCTGG CGACGACGGA CGACGGCGGC
TTCCTCCGCG TCGACCCCCA CACCCTCCAG CACCCCGAGC ACCCCCGGGT GTGGGGTCTG
GGCGACGTCG CCGACCTCGA CGCCCTGCCG TCCGGCGGCG CGCTGCGCAA GCAGGTCCCC
GTGGTGGCCC GCAACATCGC CGCCCGGCGC ACCGGCGGCA CCATGCAGCG GTACGACGGC
TACTCGATCG CCCCGGTCAC GACGTCACGG CGCAGGCTGC TGCTCGCCGA GTTCGACCGC
GCCGGGCGTT CGCAGCCGTC GGTGCCCTTC GTCGACCTCG TGAAGCCGCG CCTGCTCACC
TGGGCCTTCG ACAGGTTCCT CGAGCCGCAG GTCTACTTCC GCCGGTTGAT CCAGGGGAAG
GTCTGA
|
|---|
| Protein sequence | MSTPEHHDVV IVGGGNAGLS LAGRLRRDGA QDVVVVEPRH EHHYRPLLSY VAGGQATLDD
LRRPQQDVLP DGVRWVRDSV ASVDPERSVV VLAGGGELHY TDLALCPGSQ VDWDAIPGSE
AAVRTPYAAT SYLPASAVDT WEMLSTLTAG RAVFVISDRH VPCAPVGLKP LFLALDHWED
TGVRDSIEVE LLVESDRLVD LESADERLRQ ALEERDVRVS LATTVTSVDA QTRHLVAEQR
DVAPGRNPLT LGYDALYVAP PHRAPAWVAQ SGLATTDDGG FLRVDPHTLQ HPEHPRVWGL
GDVADLDALP SGGALRKQVP VVARNIAARR TGGTMQRYDG YSIAPVTTSR RRLLLAEFDR
AGRSQPSVPF VDLVKPRLLT WAFDRFLEPQ VYFRRLIQGK V
|
|---|
| |