Gene Sked_20310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20310 
Symbol 
ID8633666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2263368 
End bp2264261 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314787 
Protein GI269795332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.643001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.104737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCT CGAACGAGGC CCGCGACTTC CTCGTCTCTC GTCGATCACG GGTGCGGCCT 
GAGCAGGTGG GACTGACCGC CGGCCCCAAC AGACGAGTTG CGGGGTTGCG CCGCGGGGAG
GTCGCCGAGC TGGCGAACAT CAGCATCGAG TACTACTCCA AGCTCGAGCG CGGCAACCTC
AGCGGAGTCT CCGATTCGGT GCTTCGCTCC GTGGCTCGCG CCCTTCAGCT CGACGACGCG
GAGACCTCGC ACTTGTTTGA CCTCGCTCGA GCCCTGTCCA CCTCACCCAC CCGGCGTGCA
CGCGCTGACC CGCGCACGTC CGAGATCCGG GCCGGGCTCC AGCAGACCCT CGATGCGATC
ACCGACGGTC CGGCGATCGT GCGCAACGGC CGCATGGACC TGCTGGCCGC CAACGCCCTC
GGACGCGCGC TGTACTCCGA CGTCTACCTG GACCCGCGTC GGCCGGCGAA CTTCTCCAGG
TTCACGTTTC TCGACCGGGA GCGGTCCGAG CGCTTCTACC CCGACTGGGG CGCTGCCGCC
GACGTCGCCG TGGCGATCAT GCGCCTGGAA GCAGGACGTG ACCCCCATGA CCGTGACCTC
CAAGACCTCG TCGGCGAGCT CTCCACCTGC AGCGCAGACT TCCGTGAGCG GTGGGCTCGT
CACAACGTGC GCCTGCACGC TGCAGGAGTG AAGCCGTTCC ACCATGCGGT AGTCGGTGAC
CTCGACCTGA CCTACGAGGC CTTCGACCTG GCCGCGGACC TCGGCCTCAA CCTCACCATC
TACTCCGCAC CCGGCGGGTC GCCCACGGCA GACGGCCTGC GGCTCTTGGC CAGCTGGGCC
GCCACGAACG AGTCGGAGGA GAGCTCCTCC ACTCACCACG CCGAGCATTC CTAG
 
Protein sequence
MSSSNEARDF LVSRRSRVRP EQVGLTAGPN RRVAGLRRGE VAELANISIE YYSKLERGNL 
SGVSDSVLRS VARALQLDDA ETSHLFDLAR ALSTSPTRRA RADPRTSEIR AGLQQTLDAI
TDGPAIVRNG RMDLLAANAL GRALYSDVYL DPRRPANFSR FTFLDRERSE RFYPDWGAAA
DVAVAIMRLE AGRDPHDRDL QDLVGELSTC SADFRERWAR HNVRLHAAGV KPFHHAVVGD
LDLTYEAFDL AADLGLNLTI YSAPGGSPTA DGLRLLASWA ATNESEESSS THHAEHS