Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_19880 |
Symbol | |
ID | 8633623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2211973 |
End bp | 2212764 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | pseudouridine synthase family protein |
Protein accession | YP_003314746 |
Protein GI | 269795291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA CCCGTGGCGG ACGCAAGAAA GCCCGCCCGC AGGAAGCACC TCGCGACGTC CACGTCCCCG ACGGTGTGCG CCTGCAGAAG GTCCTCGCGA CGGCAGGGCT GGGTTCTCGC CGTGCGTGCG AGAACCTCAT CACGGCTGGT CGTGTGACGG TCGACGACGT GCCCGTGCAC GAGCTCGGCG TCCGCATCGA CCCCGACAAG AACGTGGTGC ACGTCGACGG GCTGCGCATC CAGCTCGACA TGTCGCTGCT GACGCTGGCT CTCAACAAGC CGCTCGGCGT GGTCTCGACC ATGCACGACC CCGAGGGTCG CCCGACGCTC GCGCAGTTCG TCGCGGACCG TCCGGAGCGC CTGTTCCACG TCGGCCGTCT CGACGCCGAC TCCGAGGGTC TGCTGCTGCT GACGAACGAC GGCGAGCTCG CCAACCGTCT GACGCACCCC AAGTACAAGA TCACCAAGAC CTACACGGTC CAGGTGGAGG GCCGCGTGCC CGCCAACCTC GGGACGACGC TCCTCAAGGG CATCGAGCTC GAGGACGGCG TCGCGACCGT CGACAAGTAC CGCCTGGTCG ACGCGACCCC GCAGGCCAGC CTCATCGAGG TCGAGCTGCA CGAGGGCCGC AACCGCATCA TCCGCCGCAT GTTCGAGACC GCCGGGTACC CCGTGACCCA GCTGGTCCGC ACCAAGATCG GCCCGATCCG CCTGGGCGAC CTGCGTCAGG GTCGCGTGCG CGTCATCGGT CAGACCGAGC TCGGCACGCT CATGGCCGAG GTCGGGCTCT AA
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Protein sequence | MSNTRGGRKK ARPQEAPRDV HVPDGVRLQK VLATAGLGSR RACENLITAG RVTVDDVPVH ELGVRIDPDK NVVHVDGLRI QLDMSLLTLA LNKPLGVVST MHDPEGRPTL AQFVADRPER LFHVGRLDAD SEGLLLLTND GELANRLTHP KYKITKTYTV QVEGRVPANL GTTLLKGIEL EDGVATVDKY RLVDATPQAS LIEVELHEGR NRIIRRMFET AGYPVTQLVR TKIGPIRLGD LRQGRVRVIG QTELGTLMAE VGL
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