Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_19680 |
Symbol | |
ID | 8633603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2191717 |
End bp | 2192289 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Clp amino terminal domain-containing protein |
Protein accession | YP_003314727 |
Protein GI | 269795272 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00680151 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCCA TGCAGCACGA GGCCACGGCG CTCGGAGCGC ACGTCTACGG CTCCGAGCAC GTCCTGCTCG GCCTGCTCGC GACAGGAGGT CTTCTCGCTG ACGCGGTCAC CGCCGTCACC CCCTCGTTGA CCTACGCCGC AGTCCACGAC GCCGTAGAGC GCTCGGCTGA CGACGCGCCT CTCATCGGGA GCCTCGGCCT CTCGACGGTC GCAGCGCAGG TGGCCGAGGC GCCACGCCCG ATCCGGACCC CTCGTAACCG ACACACGCCA GAGCTGCAGT CAGCGCTGAA CACCGCATCA GCCGGGTGGG GCCAGCTCCG CAAGAACGGC TCCCTTCCCA AGGAGAGCAA GCTGACCAGC ACGGTCCTCT GGCTCGCAGC CCTGGAACCC ACCGCCCGCG CGTCACGACT CCTGCAGGCA CTCGACGTCG ACGTCGACCA GGTCCGTGCG GAGGTGCTCG CCGCCGCAGC CACCCCTGGC GCACCGGCGC CGACCTGGCC GACCGAGGTG CGGACCGGGC CGGTCACCCG GCTGGTGCAG CGGATCTTCA GCCGCGCGAG CACGGCAGGC TGA
|
Protein sequence | MTAMQHEATA LGAHVYGSEH VLLGLLATGG LLADAVTAVT PSLTYAAVHD AVERSADDAP LIGSLGLSTV AAQVAEAPRP IRTPRNRHTP ELQSALNTAS AGWGQLRKNG SLPKESKLTS TVLWLAALEP TARASRLLQA LDVDVDQVRA EVLAAAATPG APAPTWPTEV RTGPVTRLVQ RIFSRASTAG
|
| |