Gene Sked_19000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19000 
Symbol 
ID8633535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2110693 
End bp2111703 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content75% 
IMG OID 
Productnitroreductase family protein 
Protein accessionYP_003314659 
Protein GI269795204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0843848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACGA CCGAGGTGCT CGAGCGGGTG GTGCGGGCTG CGACGCGCGC GCCGAGCGTG 
CACAACACGC AGCCGTGGAC GGTGGAGGTG GGGCTGTCGC GGGGCCGCGG AATGGTGGAC
GTCAGGGTGG ACCCGGCGCG GTCGCTGCGG CACGGCGACC CGCTGTCCCG CGAGGCGACG
ATCAGCTGCG GTGCGCTGGT GGACCATCTG GTCGTGGCGG CACGGCGCGA GGGTCTCGAC
GCCGAGGTGA CGGTGACCGC CGGTGACGGG GACCTGCGGC TGGCGCGGGT GTCGCTGTCT
CCTGGCGACC TTCCGTCGGT CGCCGAGCTG GAGCTGTCGG TCGCGACGGT GCACCGGCGG
ACGACCCGGA TCGCGCTGGA CGATCTCGTG GTCGACGACG CTCTGGTGGC ACGGCTGGTC
CGGATGGTCG CGGACGCGCA GGCGCACCTG GTCGTGCTGC CACCGGGGAG CGCTGCTCGC
GGGGTGGTGC TGCGTCAGGT GGCTCGAGCG GAGGCGCTGG CCACCGAGGA CCTGGTCGGC
CGTGCCGAGG AGGAGGCGTG GACGGGGCGA GCTGCTGCTG CCGACGGTGC TGGTGACGGT
GTGCCGGTCG AGGAACCGTG GGCGGGCCAC CCCGGTGCTG CTCCGGGTCC CGGGTCGCGC
CGCCTCAGCG ACCGAGCGGG ACCCGGAGAC GCCACCGAGC ACGGGGCCGT GCTGGCCCTC
CTGACCACTC CCGGGGACTC CCCCGACGAC TGGCTGAGGG CCGGGCGGGC GCTGAGCAGG
CTGCTGCTGG AGGCGACGGT CGCCGGACTC ACCGCGTCCT TCGCGACCAC GGTCCTGGAG
AACCCGACGA CGCGCCACGA GGTCGTCCGC TCGCTCGGCC TCGTCGGCGC CCCGCAGGTG
CTCCTGCAGC TCGGCTACGG CGAGCCCGGG GTGCGGACGC CTCGTCGTGC GCTGGGGACC
GCCGCGGTGC GGGGCGACCA CCTCGAGACC GGCGGGGCGT CGACCGCGTA G
 
Protein sequence
MLTTEVLERV VRAATRAPSV HNTQPWTVEV GLSRGRGMVD VRVDPARSLR HGDPLSREAT 
ISCGALVDHL VVAARREGLD AEVTVTAGDG DLRLARVSLS PGDLPSVAEL ELSVATVHRR
TTRIALDDLV VDDALVARLV RMVADAQAHL VVLPPGSAAR GVVLRQVARA EALATEDLVG
RAEEEAWTGR AAAADGAGDG VPVEEPWAGH PGAAPGPGSR RLSDRAGPGD ATEHGAVLAL
LTTPGDSPDD WLRAGRALSR LLLEATVAGL TASFATTVLE NPTTRHEVVR SLGLVGAPQV
LLQLGYGEPG VRTPRRALGT AAVRGDHLET GGASTA