| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_18950 |
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| Symbol | |
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| ID | 8633530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2102802 |
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| End bp | 2104622 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_003314654 |
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| Protein GI | 269795199 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.318822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.131435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGTA AGAGCAGCAA CGGAATCCAC CGGGCGGTGT TCTGGCCGGC GGCCATCATC
GTCCTCGTCT TCGCCACCCT GGCCATCGTC GCCCCCGAGG CGTCCGAGCG GGTCTTCGCC
TCCGTGCAGA GCACGATCGT CGCGAACTTC AACTGGTACT ACGTGCTCCT CGCCGCGGGC
TTCGTGGTCT TCTGCCTCTG GATGGGCTTC AGCCGCTTCG GCGACATCAA GCTCGGGCGC
GACGACGACG AGCCGGAGTT CTCGCTCCTG TCGTGGTTCT CGCTGCTGTT CGCCGCAGGC
ATGGGCATCG GCCTCGTGTT CTACGGCGTC AGCGAGCCCC TGAGCCACTT CGTCACCCCG
CGCCCCGGCG TCGAGGGGAC ACCGGCGCAG CTCGCCCAGC AGGCCATGTC GCAGACGTTC
CTGCACTGGG GCGTGCACGC CTGGTCCATC TACGTGGTGA TCGGCCTGGC TCTCGCCTAC
GCGATCCACC GCCGCCGTCG CCCCATCTCC ATCCGCTGGA CCCTCGAGCC GCTGCTCGGC
CGCCGCGTGA AGGGCCGCTG GGGCGACGCG ATCGACGTCG TCGCCCTCGT CGGGACCCTC
TTCGGTGTCG CGACCTCCCT CGGGCTCGGT GTGCTGCAGA TCGGTGCCGG CCTCGACAGC
GCCGGCATCG TCGAGCCCAC CGACACCATC AGCGTCATCC TCATCCTCGT CATCACCTGC
TTCGTGCTGT TCTCCGTCCT CTCCGGCGTC GCCAAGGGCA TGAAGTGGCT GTCCAACGCC
AACCTCATCC TCGCGGCCGT GATCCTCACG ATCGTGCTCG CCGTCGGCCC CACGCAGTTC
CTGCTGCGCG AGTTCGTCCA GTCCATCGGC AACTACCTCC AGGGCTTCAT CGGCGCCGCG
CTCAACGTCT CGGCGTTCTC CGGTGCTGAG GGCGAGGCCT GGCAGGCCAG CTGGACCACC
TTCTACTGGG GCTGGTGGAT CTCGTGGGCG CCGTTCGTCG GCGTGTTCAT CGCGCGCATC
TCCCGCGGCC GCACGGTCCG CCAGTTCGTC ACCGGCGTCA TCCTCGTGCC GACCACCATC
ACGGCGCTCT GGTTCGCCGT GCTCGGCGGG ACGGCCCTCA AGATGGAGCT CGACAACCCG
GGCACCCTCA CCGAGGGCGG CGAGGTCAAC ATCGAGGGCG CGCTGTTCTC GCTGCTCGAC
CAGCTGCCCG GCGGCTCCGT CCTGACCATC GGCGCGATCA TCCTCATCGC GATCTTCTTC
GTCACGTCGG CCGACTCCGG TTCGCTCGTC ATGGGCATGC TCGCCTCGGG TGGTGCGACC
GAGCCCAAGG CGTGGGTCCG TGTGTTCTTC GCCTGCGCCA CCTCGCTGCT CGCCATCGCG
CTGCTGCTCT CGGGTGGGCT CGAGGCGCTC AAGACGGCGG CGATCATCAT CGCGCTGCCG
TTCTCGGTGA TCATGATCGG CATCTGCTGG TCGACGTACA TCGCGTTCTC CCGCGAGGAC
CGTGCCTACG CCAAGGCGCG ACGGGCGGCG TTCCTCAGCC ACATCGGTGA CTACTACGGC
CTCGAGGTCG ACGCACCGCT CGAGCGCCCT GCTGTGTCGC CGTTCGCGAA CATCCTCGCG
AAGGTCCGCG CCACCACGCA CCGCGGGCAG GACGCACAGG CGAAGGCCCG TGCCGCCGGG
GCCGCGGTCG ACGGTGCCGG CCCGGCCGGT CGCGCCGAGG AGGTCCGCAC GACACCGGTG
GCGGACATCG CCATCGAGCC CGACCCGGGC GCACCGGCTC CCGAGGACGT CATCGGCAGC
GACGAGCGTC GGACCGACTG A
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| Protein sequence | MEGKSSNGIH RAVFWPAAII VLVFATLAIV APEASERVFA SVQSTIVANF NWYYVLLAAG
FVVFCLWMGF SRFGDIKLGR DDDEPEFSLL SWFSLLFAAG MGIGLVFYGV SEPLSHFVTP
RPGVEGTPAQ LAQQAMSQTF LHWGVHAWSI YVVIGLALAY AIHRRRRPIS IRWTLEPLLG
RRVKGRWGDA IDVVALVGTL FGVATSLGLG VLQIGAGLDS AGIVEPTDTI SVILILVITC
FVLFSVLSGV AKGMKWLSNA NLILAAVILT IVLAVGPTQF LLREFVQSIG NYLQGFIGAA
LNVSAFSGAE GEAWQASWTT FYWGWWISWA PFVGVFIARI SRGRTVRQFV TGVILVPTTI
TALWFAVLGG TALKMELDNP GTLTEGGEVN IEGALFSLLD QLPGGSVLTI GAIILIAIFF
VTSADSGSLV MGMLASGGAT EPKAWVRVFF ACATSLLAIA LLLSGGLEAL KTAAIIIALP
FSVIMIGICW STYIAFSRED RAYAKARRAA FLSHIGDYYG LEVDAPLERP AVSPFANILA
KVRATTHRGQ DAQAKARAAG AAVDGAGPAG RAEEVRTTPV ADIAIEPDPG APAPEDVIGS
DERRTD
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