Gene Sked_17950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17950 
Symbol 
ID8633431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2001528 
End bp2002184 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content74% 
IMG OID 
Productpyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
Protein accessionYP_003314556 
Protein GI269795101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTG GCCCTGCTGT ACCCGAACGA CCCGCTACCG AGCAGACCGC ACCCGTCGAG 
CCCCCCGCGC CGACAGAGGT CCTCGGCGCC CCCGAGATCG CCCGGGCGCT CACCCGCATC
GCCCACGAGA TCCTCGAGCG GAACAAGGGC GGCTCTGACG TCGTCCTCCT CGGCATCCCC
ACCCGTGGCG TCCCCCTCGC CGAGCGGCTC GCGCTGCGCC TGGCGGAGGT CGAGCCCGGC
CTCGACGCCG CCGGCCTCGT GGGCACCCTC GACGTGACCA TGCACCGCGA CGACCTGCAC
CGCCAGCCGC CACGCGCCAT CGGGACCACC ACGCTCCCGG CAGCCGGGAT CGACGGCAAG
GTGGTGGTCC TCGTCGACGA CGTCCTCTAC TCCGGCCGGA CCATCCGCGC CGCCCTCGAC
GCGATCAGCG ACATCGGCCG CCCGCGCGCC GTCCAGCTGG CCGCGCTCGT CGACCGCGGG
CACCGCGAGC TGCCCATCCG CCCGGACTAC GTCGGCAAGA ACCTGCCCAC CTCGGTCCAC
GAGCGCGTCC ACGTGCGCGT CGCGGAGATC GACGGCGACG ACGCGGTGCT CATCAGCCAG
GGGCCCACGT CGCCCGAGGC GACCACGGCG CAGGCCGCGG GGGAGGCGTC ACGATGA
 
Protein sequence
MTSGPAVPER PATEQTAPVE PPAPTEVLGA PEIARALTRI AHEILERNKG GSDVVLLGIP 
TRGVPLAERL ALRLAEVEPG LDAAGLVGTL DVTMHRDDLH RQPPRAIGTT TLPAAGIDGK
VVVLVDDVLY SGRTIRAALD AISDIGRPRA VQLAALVDRG HRELPIRPDY VGKNLPTSVH
ERVHVRVAEI DGDDAVLISQ GPTSPEATTA QAAGEASR