| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17740 |
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| Symbol | |
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| ID | 8633410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 1979898 |
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| End bp | 1981571 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | type II secretion system protein E (GspE) |
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| Protein accession | YP_003314535 |
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| Protein GI | 269795080 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.898246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGC TCGGAGAGAT CCTGCTCGAG GAAGGCCTCG TCAACGAGGC CCAGCTGATG
GCTGCCCTCG ACGAGCAGGT GGTCCGGGGG ACCAGCCTCG GGCGTGTGCT CGTCGAGCTC
GGTGTCCTCT CCGAGGGCCA GCTCGTGTCG GCACTGGCCG CGCAGGTCGG CATGCAGTTC
GTGGACCTCG ACACCTTCCC GGTCGACCGC GCGGCCGTCA GCCGCCTCAC CGGCGCCGTG
TGCCGGCGCT ACACCGTGCT GCCCATCGCC TTCGAGGGCG ACGCCCTCGT CCTCGCCATG
GCCGACCCGG GCAACGTGCT CGCCGTCGAC GACGTGCGCT CGTCGACCGG CATGCAGGTG
CTGCCGGTCG TCGCCACGCA CGAGGACCTC TCACGCGCCA TCGACCGGTT CGTCCGCGCG
GACGACGAGA TGGACAACCT CACCAACGCG TTCACCGAGG AGCAGCGCGT CGACGACGTC
GACCTCTCCA AGATCGGCGA CTCCGTCGAC GACGACGCGC CGATCGTCCG GTACGTGAAC
CTCATCGTCA CGCAGGCCAT CACGGACCGC GCCTCCGACA TCCACATCGA GCCGAGCGAG
CACGACCTCC GCGTGCGGTA CCGCATCGAC GGCGTGCTCC ACGAGATGCA GAGGTCGCCC
AAGAACATCA CCGGGGGAGT GATCTCCCGC GTGAAGATCC TCTCGGACAT CGACATCGCG
GAACGCCGCA AGCCCCAGGA CGGCCGCATG TCCGTCACCC ACAACGGCCG AAAGATCGAC
CTCCGTGTCG CGACCCTGCC GACGGTGTGG GGCGAGAAGA TCGTCATGCG AATCCTCGAC
AACTCCACGG CAAGCCTCGA CCTGCGCGAC CTGTCCTTCG GCGAGGAGAA CTACGAGGTC
TACTCCGAGG CGTACAACAA GCCCTACGGC ATGATCCTCG TGACCGGCCC GACCGGGTCC
GGCAAGTCCA CGACCCTGTA CGCGACGCTC AACGCGGTGT CCAAGCCCGA GATCAACGTC
ATCACCGTCG AGGACCCCGT CGAGTACCGC CTCCCCGGCA TCAACCAGGT GCAGGTGAAC
CCCAAGGCCG GCCTGACCTT CGCGGGCGCG CTGCGCTCGA TCCTGCGCTC CGACCCCGAC
GTCGTGCTGC TCGGTGAGAT CCGTGACCAC GAGACCGCCC AGATCGCCAT CGAGGCCGCG
CTCACCGGTC ACCTCGTGCT CTCGACCCTG CACACCAACG ACGCACCGTC CGCCATCACC
CGCCTCGTCG AGATGGGCAT CGAGCCCTTC CTCGTGGGGT CGGCCATCGA CTGCATCGTG
GCGCAGCGAC TGGCGCGTCG GCTCTGCGGG AAGTGCAAGG AGCCCTACGA GCCCAGCGAG
GTCGAGCTGG TCGCCGCGCG GTTCCCGTGG ACGGAGGGTG AGCCCAAGCC GGTGCTGCAC
CGCCCGGGCG GCTGCACCAC GTGCTCCGGC ACCGGGTACC GGGGTCGTCT CGCCCTCCAC
GAGGTCATGC GCGTCACCGA GGACATCGAG CGTCACGCCG TCGCCGGGTC CTCCTCCGCG
GAGATCGCGA AGACCGCCGT GGCCCAGGGC ATGCGCAGCC TGCGCGACGA CGGCTGGATG
AAGGTCGTCG CCGGGCAGAC GTCGATCGAG GAGATCCTCC GCGTCGTCGC TTAA
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| Protein sequence | MKQLGEILLE EGLVNEAQLM AALDEQVVRG TSLGRVLVEL GVLSEGQLVS ALAAQVGMQF
VDLDTFPVDR AAVSRLTGAV CRRYTVLPIA FEGDALVLAM ADPGNVLAVD DVRSSTGMQV
LPVVATHEDL SRAIDRFVRA DDEMDNLTNA FTEEQRVDDV DLSKIGDSVD DDAPIVRYVN
LIVTQAITDR ASDIHIEPSE HDLRVRYRID GVLHEMQRSP KNITGGVISR VKILSDIDIA
ERRKPQDGRM SVTHNGRKID LRVATLPTVW GEKIVMRILD NSTASLDLRD LSFGEENYEV
YSEAYNKPYG MILVTGPTGS GKSTTLYATL NAVSKPEINV ITVEDPVEYR LPGINQVQVN
PKAGLTFAGA LRSILRSDPD VVLLGEIRDH ETAQIAIEAA LTGHLVLSTL HTNDAPSAIT
RLVEMGIEPF LVGSAIDCIV AQRLARRLCG KCKEPYEPSE VELVAARFPW TEGEPKPVLH
RPGGCTTCSG TGYRGRLALH EVMRVTEDIE RHAVAGSSSA EIAKTAVAQG MRSLRDDGWM
KVVAGQTSIE EILRVVA
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