| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17580 |
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| Symbol | |
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| ID | 8633394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 1957943 |
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| End bp | 1960270 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | (p)ppGpp synthetase, RelA/SpoT family |
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| Protein accession | YP_003314519 |
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| Protein GI | 269795064 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.091974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGG ACACCCGCTC GACAGACGCG CCCGTCGACC CGGCCCCCGT GAGCACGCCG
CCGCTCGGCA TCAGCTCCGC CAGCCGCGTC CGGTCTCGCC TCGTGAGGTT CGGCTCGCGG
CACGCCGTCG GCACCCCCGC GCTCGAGCCG TTGCTGCGCG CGGTGCGCGC CAACCACCCG
AAGGCCGACG TCTCGATCAT CGAGCGTGCC TACGTCACCG CGGAGAAGGC CCACCGCGGC
CAGATGCGCA AGAGCGGCGA CCCGTACATC ACGCACCCCG TCGCGGTCTC GACCATCCTC
GCCGAGCTCG GCATGACGCC TCCCACGCTC GCCGCGGCTC TGCTGCACGA CACGGTCGAG
GACACCGACT ACTCGCTCGA CCAGCTGCGT CGCGACTACG GCGACGAGAT CGCCATGCTG
GTCGACGGCG TCACCAAGCT CGACAAGGTG ACCTACGGTG ACGCCGCGCA GGCCGAGACG
GTCCGCAAGA TGGTCGTCGC CATGGCCCGC GACATCCGCG TACTCGTCAT CAAGCTCGCG
GACCGCCTGC ACAACGCCCG CACCTGGAAG TTCGTGCCGT CGTCCTCCGC GCAGCGCAAG
GCGCGCGAGA CCATCGAGAT CTACGCGCCC CTCGCGCACC GCCTCGGCAT GAACACCATC
AAGTGGGAGC TCGAGGACCT GTCCTTCCAG ACCCTCTACC CCAAGGTGTA CGACGAGATC
GTGCACCTGG TGAGCGAGCG GGCGCCGGCG CGCGAGGAGT ACCTGGCGCT GGTCCGCGAG
CAGATCACGG CGGACCTGCG GACCTCGAAG ATCAAGGCGA CGGTCACCGG CCGGCCCAAG
CACTACTACT CGATCTACCA GAAGATGATC GTCCGCGGTC ACGACTTCGC CGACATCTAC
GACCTCGTCG GCACGCGCGT CCTCGTGGAC TCGGTGCGCG ACTGCTACGC GACGCTCGGC
GCCCTCCACG CGCGGTGGAA CCCCGTCCCC GGACGGTTCA AGGACTACAT CGCGATGCCG
AAGTTCAACA TGTACCAGTC GTTGCACACG ACGGTCATCG GCCCCGGCGG CAAGCCCGTC
GAGATCCAGA TCCGCACCCA CGAGATGCAC CGCCGCGCCG AGTACGGCGT CGCCGCGCAC
TGGAAGTACA AAGAGGCCGC CAAGGACGGC GCCGACGCCG CCGGCAACGA CATGCAGTGG
CTCCGCCAGC TCGTCGACTG GCAGCGCGAG ACCGCTGACC CGTCGGAGTT TCTCGACTCG
CTGCGCTTCG AGATCAGCGG GGGAGAGGTC TACGTCTTCA CCCCCAAGGG CGACGTGGTC
GCCCTGCCTG CGGGCTCGAC CCCCGTCGAC TTCGCGTACA CGGTGCACAC CGAGGTGGGG
CACCGCACGA TGGGTGCCCG GGTCAACGGT CGGCTCGTCC CGCTCGACTC CGCGCTCGAC
AACGGCGACG TGGTCGACGT GCTCACCTCC AAGTCCGAGA CGGCCGGGCC GTCGCGTGAC
TGGATGGCCT TCGTCAAGAG CCCGCGCGCC AAGAACAAGA TCCGGCAGTG GTTCTCCAAG
GAGCGCCGCG AGGAGGCCAT CGAGCAGGGC AAGGACGCGA TCGCGAAGGC GATGCGCAAG
CAGAACCTCC CGATCCAGCG CATCCTGTCG CACGAGTCCA TCGTCACCAC CGCGCACGAG
ATGCGCTTCG CCGACGTGTC CGCGCTCTAC GCCGCGGTCG GCGAGGGGCA GATCTCAGCC
GCGAACGTCG TCCAGAAGCT CGTCCAGGCG ATGGGCGGCG AGGACAGCAA CGCCGAGGAC
ATGGCCGAGA TCGCCCGGCC GGGCCACCCG CAGCGCCGGG CGCGGACCGG CGACCCGGGC
GTCGTCGTCA AGGGTGTCGA CGACATCTGG GTCAAGCTCG CCAAGTGCTG CACCCCGGTC
CCGGGGGACT CGATCGTCGG GTTCATCACG CGGGGCCAGG GGGTCAGCGT GCACCGCGCC
GACTGCGCCA ACTTCGAGGC CCTCCGGTCG CAGCCCGAGC GGATCGTGGA CGTCGAGTGG
ACCACGGGCA GCAGCGCGCT GTTCCTCGTG CAGATCCAGG TCGAGGCGCT CGACCGCTCC
CGTCTGCTCT CCGACGTGAC CCGGGTGCTC TCGGACCACC ACGTGAACAT CCTCTCGGCG
ACGGTCTCGA CCTCGAGCGA CCGGGTCGCG CTCTCGCGCT TCGTCTTCGA GATGGCCGAG
CCCGGCCACC TCGCGAGCGT GCTCACGGCC GTCCGCAAGA TCGACGGGGT GTTCGACGTC
TACCGCATCA CGGGCTCGAA GGCCGCGGAG CCCGTCGTCC ACGCCTGA
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| Protein sequence | MTEDTRSTDA PVDPAPVSTP PLGISSASRV RSRLVRFGSR HAVGTPALEP LLRAVRANHP
KADVSIIERA YVTAEKAHRG QMRKSGDPYI THPVAVSTIL AELGMTPPTL AAALLHDTVE
DTDYSLDQLR RDYGDEIAML VDGVTKLDKV TYGDAAQAET VRKMVVAMAR DIRVLVIKLA
DRLHNARTWK FVPSSSAQRK ARETIEIYAP LAHRLGMNTI KWELEDLSFQ TLYPKVYDEI
VHLVSERAPA REEYLALVRE QITADLRTSK IKATVTGRPK HYYSIYQKMI VRGHDFADIY
DLVGTRVLVD SVRDCYATLG ALHARWNPVP GRFKDYIAMP KFNMYQSLHT TVIGPGGKPV
EIQIRTHEMH RRAEYGVAAH WKYKEAAKDG ADAAGNDMQW LRQLVDWQRE TADPSEFLDS
LRFEISGGEV YVFTPKGDVV ALPAGSTPVD FAYTVHTEVG HRTMGARVNG RLVPLDSALD
NGDVVDVLTS KSETAGPSRD WMAFVKSPRA KNKIRQWFSK ERREEAIEQG KDAIAKAMRK
QNLPIQRILS HESIVTTAHE MRFADVSALY AAVGEGQISA ANVVQKLVQA MGGEDSNAED
MAEIARPGHP QRRARTGDPG VVVKGVDDIW VKLAKCCTPV PGDSIVGFIT RGQGVSVHRA
DCANFEALRS QPERIVDVEW TTGSSALFLV QIQVEALDRS RLLSDVTRVL SDHHVNILSA
TVSTSSDRVA LSRFVFEMAE PGHLASVLTA VRKIDGVFDV YRITGSKAAE PVVHA
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