Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_17410 |
Symbol | |
ID | 8633377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1941332 |
End bp | 1943362 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase |
Protein accession | YP_003314502 |
Protein GI | 269795047 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.595758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0835389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGAGT CGCCCGAGTC GTCAGCGCTG CACCCCGACG TCACCATCAC CCTCGACGGC ACGCAGACGA CAGTGACCAC CGCGACCACC GGCACCGAGC TCTTCGCCGA CCGCAAGGAC GTCGTCGTGG TGCGCGTGGG CGGCGAGCTC AAGGACCTCG CGAGCACCTT CACCGAGGGA GACGTCGTCG AGCCGGTCAC CATCGACTCG CCCGACGGCC TCGACGTGCT GCGCCACTCC GCCGCGCACG TCCTCGCCCA GGCGGTCCAG CAGGTGAACC CGACCGCGAA GCTCGGCATC GGCCCGCCCA TCACCGACGG CTTCTACTAC GACTTCGACG TCGCCGAGCC CTTCACCCCC GAGGACCTCA AGGCCCTCGA GAAGGCCATG ATGCGCATCG TCAAGGAGGG CCAGACCTTC CGCCGGCGCG TCGTCACCGA GGCCGAGGCG CTCGTCGACC TCGCCGACGA GCCCTACAAG ATCGAGCTCG TGGGCCTCAA GGGCTCGAGC GACACCGCGG GCGAGGGGGC CTCGGTCGAG GTCGGTGCCG GCGAGCTGAG CATCTACCAG AACGTCAGGC GCAACGGCGA CGTGGCCTGG GAAGACCTGT GCCGCGGCCC GCACCTGCCC AGCACCCGCC TCATCGGCAA CGGCTTCCAG CTCATGCGCT CGGCCGCCGC CTACTGGCGC GGCAGCGAGA AGAACCCGCA GCTGCAGCGC GTCTACGGCA CCGCCTGGCC CACCAAGGAC GAGCTCAAGG CTCACCTCGA GCGTCTCGCC GAGGCCGAGC GCCGCGACCA CCGACGCCTG GGCAGCGAGC TGGACCTCTT CTCGTTCCCG GACGAGATCG GCTCCGGGCT GGCCGTGTTC CACCCCAAGG GCGGCATCAT CCGCTCCGAG ATGGAGCAGT ACTCCCGCAA GCGGCACGTC GAGGAGGGCT ACTCCTTCGT CAACACCCCG CACATCACCA AGGAGCAGCT GTTCCTCACC TCGGGGCACC TGGACTGGTA CGCCGACGGC ATGTACCCGC CCATGCACCT CGACGAGGAG GTCGACGCTG ACGGGACCGT GCGCAAGGCC GGGCAGAACT ACTACCTCAA GCCCATGAAC TGCCCGATGC ACAACCTCAT CTTCGCCTCG CGCGGACGCT CGTACCGCGA GCTGCCGCTG CGCCTGTTCG AGTTCGGCAC GGTCTACCGC TACGAGAAGT CCGGCGTCGT GCACGGTCTG GCCCGCGGGC GCGGCTTCAC GCAGGACGAC GCGCACATCT ACTGCACCCG CGAGCAGATG AAGGACGAGC TCACCACCTC GCTCAACTTC GTGCTCGGCC TGCTCAAGGA CTACGGCCTC GACGACTTCT ACCTCGAGCT GTCGACCCGT GACCCGGAGA AGTCCGTCGG CACCGACGAC GCCTGGGAGG AGGCCACCCG CACCCTCGAG GAGGTCGCGG TCGCCTCAGG GCTCGACCTC GTCCCGGACC CGGGCGGCGC CGCCTTCTAC GGCCCCAAGA TCTCCGTCCA GGCCAAGGAC GCGATCGGTC GCACCTGGCA GATGTCGACC ATCCAGCTCG ACTTCAACCT CCCCGAGAAG TTCGACCTCG AGTTCGCCGC GGCCGACGGC ACCCGCCAGC GTCCGGTGAT GATCCACCGT GCGCTCTTCG GGTCGATCGA GCGGTTCTTC GCCGTGCTCA CCGAGCACTA CGCGGGCGCC TTCCCGGCCT GGCTCGCGCC CGTGCAGGTC CTCGCGGTCC CCGTCGCCGA GCCCTTCAAC GACTACCTCG CCGACGTGGT CGCCCAGCTC CGCAAGGCCG GCGTCCGCGC CGACCTCGAC GACAGCAGCG ACCGGTTCGC CAAGAAGATC CGCACGGCCA GCACGCAGAA GATCCCCTTC GTGCTCATCG CCGGGGGAGA GGACGCCGAG GCCGGGGCCG TGTCGTTCCG CTACCGCGAC GGCCGCCAGG AGAACGGTGT CCCGGTCGCC GAGGCGATCG AGCGCGTCCT CGCCGCAGTC CGGGACCGGG TCCAGGTGTG A
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Protein sequence | MPESPESSAL HPDVTITLDG TQTTVTTATT GTELFADRKD VVVVRVGGEL KDLASTFTEG DVVEPVTIDS PDGLDVLRHS AAHVLAQAVQ QVNPTAKLGI GPPITDGFYY DFDVAEPFTP EDLKALEKAM MRIVKEGQTF RRRVVTEAEA LVDLADEPYK IELVGLKGSS DTAGEGASVE VGAGELSIYQ NVRRNGDVAW EDLCRGPHLP STRLIGNGFQ LMRSAAAYWR GSEKNPQLQR VYGTAWPTKD ELKAHLERLA EAERRDHRRL GSELDLFSFP DEIGSGLAVF HPKGGIIRSE MEQYSRKRHV EEGYSFVNTP HITKEQLFLT SGHLDWYADG MYPPMHLDEE VDADGTVRKA GQNYYLKPMN CPMHNLIFAS RGRSYRELPL RLFEFGTVYR YEKSGVVHGL ARGRGFTQDD AHIYCTREQM KDELTTSLNF VLGLLKDYGL DDFYLELSTR DPEKSVGTDD AWEEATRTLE EVAVASGLDL VPDPGGAAFY GPKISVQAKD AIGRTWQMST IQLDFNLPEK FDLEFAAADG TRQRPVMIHR ALFGSIERFF AVLTEHYAGA FPAWLAPVQV LAVPVAEPFN DYLADVVAQL RKAGVRADLD DSSDRFAKKI RTASTQKIPF VLIAGGEDAE AGAVSFRYRD GRQENGVPVA EAIERVLAAV RDRVQV
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