Gene Sked_17410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17410 
Symbol 
ID8633377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1941332 
End bp1943362 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content69% 
IMG OID 
Productthreonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase 
Protein accessionYP_003314502 
Protein GI269795047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.595758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0835389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAGT CGCCCGAGTC GTCAGCGCTG CACCCCGACG TCACCATCAC CCTCGACGGC 
ACGCAGACGA CAGTGACCAC CGCGACCACC GGCACCGAGC TCTTCGCCGA CCGCAAGGAC
GTCGTCGTGG TGCGCGTGGG CGGCGAGCTC AAGGACCTCG CGAGCACCTT CACCGAGGGA
GACGTCGTCG AGCCGGTCAC CATCGACTCG CCCGACGGCC TCGACGTGCT GCGCCACTCC
GCCGCGCACG TCCTCGCCCA GGCGGTCCAG CAGGTGAACC CGACCGCGAA GCTCGGCATC
GGCCCGCCCA TCACCGACGG CTTCTACTAC GACTTCGACG TCGCCGAGCC CTTCACCCCC
GAGGACCTCA AGGCCCTCGA GAAGGCCATG ATGCGCATCG TCAAGGAGGG CCAGACCTTC
CGCCGGCGCG TCGTCACCGA GGCCGAGGCG CTCGTCGACC TCGCCGACGA GCCCTACAAG
ATCGAGCTCG TGGGCCTCAA GGGCTCGAGC GACACCGCGG GCGAGGGGGC CTCGGTCGAG
GTCGGTGCCG GCGAGCTGAG CATCTACCAG AACGTCAGGC GCAACGGCGA CGTGGCCTGG
GAAGACCTGT GCCGCGGCCC GCACCTGCCC AGCACCCGCC TCATCGGCAA CGGCTTCCAG
CTCATGCGCT CGGCCGCCGC CTACTGGCGC GGCAGCGAGA AGAACCCGCA GCTGCAGCGC
GTCTACGGCA CCGCCTGGCC CACCAAGGAC GAGCTCAAGG CTCACCTCGA GCGTCTCGCC
GAGGCCGAGC GCCGCGACCA CCGACGCCTG GGCAGCGAGC TGGACCTCTT CTCGTTCCCG
GACGAGATCG GCTCCGGGCT GGCCGTGTTC CACCCCAAGG GCGGCATCAT CCGCTCCGAG
ATGGAGCAGT ACTCCCGCAA GCGGCACGTC GAGGAGGGCT ACTCCTTCGT CAACACCCCG
CACATCACCA AGGAGCAGCT GTTCCTCACC TCGGGGCACC TGGACTGGTA CGCCGACGGC
ATGTACCCGC CCATGCACCT CGACGAGGAG GTCGACGCTG ACGGGACCGT GCGCAAGGCC
GGGCAGAACT ACTACCTCAA GCCCATGAAC TGCCCGATGC ACAACCTCAT CTTCGCCTCG
CGCGGACGCT CGTACCGCGA GCTGCCGCTG CGCCTGTTCG AGTTCGGCAC GGTCTACCGC
TACGAGAAGT CCGGCGTCGT GCACGGTCTG GCCCGCGGGC GCGGCTTCAC GCAGGACGAC
GCGCACATCT ACTGCACCCG CGAGCAGATG AAGGACGAGC TCACCACCTC GCTCAACTTC
GTGCTCGGCC TGCTCAAGGA CTACGGCCTC GACGACTTCT ACCTCGAGCT GTCGACCCGT
GACCCGGAGA AGTCCGTCGG CACCGACGAC GCCTGGGAGG AGGCCACCCG CACCCTCGAG
GAGGTCGCGG TCGCCTCAGG GCTCGACCTC GTCCCGGACC CGGGCGGCGC CGCCTTCTAC
GGCCCCAAGA TCTCCGTCCA GGCCAAGGAC GCGATCGGTC GCACCTGGCA GATGTCGACC
ATCCAGCTCG ACTTCAACCT CCCCGAGAAG TTCGACCTCG AGTTCGCCGC GGCCGACGGC
ACCCGCCAGC GTCCGGTGAT GATCCACCGT GCGCTCTTCG GGTCGATCGA GCGGTTCTTC
GCCGTGCTCA CCGAGCACTA CGCGGGCGCC TTCCCGGCCT GGCTCGCGCC CGTGCAGGTC
CTCGCGGTCC CCGTCGCCGA GCCCTTCAAC GACTACCTCG CCGACGTGGT CGCCCAGCTC
CGCAAGGCCG GCGTCCGCGC CGACCTCGAC GACAGCAGCG ACCGGTTCGC CAAGAAGATC
CGCACGGCCA GCACGCAGAA GATCCCCTTC GTGCTCATCG CCGGGGGAGA GGACGCCGAG
GCCGGGGCCG TGTCGTTCCG CTACCGCGAC GGCCGCCAGG AGAACGGTGT CCCGGTCGCC
GAGGCGATCG AGCGCGTCCT CGCCGCAGTC CGGGACCGGG TCCAGGTGTG A
 
Protein sequence
MPESPESSAL HPDVTITLDG TQTTVTTATT GTELFADRKD VVVVRVGGEL KDLASTFTEG 
DVVEPVTIDS PDGLDVLRHS AAHVLAQAVQ QVNPTAKLGI GPPITDGFYY DFDVAEPFTP
EDLKALEKAM MRIVKEGQTF RRRVVTEAEA LVDLADEPYK IELVGLKGSS DTAGEGASVE
VGAGELSIYQ NVRRNGDVAW EDLCRGPHLP STRLIGNGFQ LMRSAAAYWR GSEKNPQLQR
VYGTAWPTKD ELKAHLERLA EAERRDHRRL GSELDLFSFP DEIGSGLAVF HPKGGIIRSE
MEQYSRKRHV EEGYSFVNTP HITKEQLFLT SGHLDWYADG MYPPMHLDEE VDADGTVRKA
GQNYYLKPMN CPMHNLIFAS RGRSYRELPL RLFEFGTVYR YEKSGVVHGL ARGRGFTQDD
AHIYCTREQM KDELTTSLNF VLGLLKDYGL DDFYLELSTR DPEKSVGTDD AWEEATRTLE
EVAVASGLDL VPDPGGAAFY GPKISVQAKD AIGRTWQMST IQLDFNLPEK FDLEFAAADG
TRQRPVMIHR ALFGSIERFF AVLTEHYAGA FPAWLAPVQV LAVPVAEPFN DYLADVVAQL
RKAGVRADLD DSSDRFAKKI RTASTQKIPF VLIAGGEDAE AGAVSFRYRD GRQENGVPVA
EAIERVLAAV RDRVQV