| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_16890 |
|---|
| Symbol | |
|---|
| ID | 8633325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1886688 |
|---|
| End bp | 1887314 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003314451 |
|---|
| Protein GI | 269794996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.144675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.127791 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCG AACCCGTCAC CGAGGACGCC CTGCGGGGCA GGCTCGTCGA GCGCATCCTC
GTGCACCCGG CGCCTGCTGC GCTGCGCGTG CTGATCGACG GCCACCCCTC GACGGATACT
GGCCAGCTGG CCGACTCGCT CGTCGAGCCG TTGCGCGCCG CAGGACGCCC CGTGGCGCGT
ATCCGGGTCG ACGACTTCCT GCGGCCCGCG TCGTTGCGCC TCGAGATGGG TCGCCGCGAC
CCCGACAGCC TCCTCGACGC GTGGATCGAC GTCGCCGGTC TCAACCGCGA GGTGCTCACC
GCCGTCGGGC CCGAGGGGCA GGGCCGCTAC CTGCCGACGC TGCGCGACCC CGTCACGGAC
CGTGCGACCC GCGCACCCTA CGTCGACGCG CCGCCCGGCC TCGTGGTGCT GCTCGACGGG
TCGCTGGCGA TGGGCCGCTG GCTGGACCTC GACCTCGTTG TGCACCTCTC GCTGCGGTCC
TCGACGATCA CGCGACGCAC CTCCGACCAG GACCGCTGGA CGCTCGAGGC CTACGAGCGC
TACCGCGAGG AGGTCGAGCC CGAGGTCATG GCCGACGTCG TCGTCCGGGT CGACGACGCG
CGTCGGCCAG CGGTGGTCAC GCGCTGA
|
|---|
| Protein sequence | MRVEPVTEDA LRGRLVERIL VHPAPAALRV LIDGHPSTDT GQLADSLVEP LRAAGRPVAR
IRVDDFLRPA SLRLEMGRRD PDSLLDAWID VAGLNREVLT AVGPEGQGRY LPTLRDPVTD
RATRAPYVDA PPGLVVLLDG SLAMGRWLDL DLVVHLSLRS STITRRTSDQ DRWTLEAYER
YREEVEPEVM ADVVVRVDDA RRPAVVTR
|
|---|
| |