Gene Sked_16860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16860 
Symbol 
ID8633322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1883548 
End bp1884324 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content73% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003314448 
Protein GI269794993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.85724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.036031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC ACACCGGCGC CCCTGACCAG CCCAGCAGCG CTGCCGAACC TGGCACCGCT 
GCGCCGCAGA ACGCCGCTGA CCAGCCCGGC ACCCCCAGGA TCCGGGTGCT GCTCGTCGAC
GACCAGGAGC TGTTCCGCTC GGGCATCGCG GTGATCGTCG ACGCGCAGGA CGGCCTCGAG
GTCGTCGGCC AGGCGGCCGA CGGGAGCGAA GCCGTCCGGA TGGTCGACGA CCTCTCTCCC
GACGTGGTCC TCATGGACGT GCGGATGCCC GAGCTCGACG GTGTCGAGGC CACCCGGCAG
ATCTTCGCTC CGGCCCGTGC GGCCTCTCGC GCCGGCCCGG TCCGGGTGAT CGTGCTGACC
ACCTTCGACC TGGACGACCG CGCCGCGGCG GCCATCCGCT ATGGCGCGAG CGGGTTCCTG
CTCAAGGACG CGACGCCGGC CATGCTGCGC GACGCGATCC GCACGGTGCA CGCGGGCAAC
GCCGTCCTCG CGCCGGACGA CCTGTCGACG CTCCTCGACG GCAGGTTCCG CGCGCGACGG
CCGAGCCCTC CCGGCCTCGA GGACCTCACC CCGAAGGAGC GCGAGGTGCT GGCGGCGGTC
GCCGCAGGCC TCAACAACGC CGAGATCGCC CGACGCGCGT TCGTCAGCGA GTCGACGGTC
AAGACCCACG TCGGCGCGGT CCTGCGCAAG CTCGGCCTGC GTGACCGGGT CCAGGTCGTC
GTGCTCGCGC ACGAGCACGG GCTGGTGGAC CCAGCCCTCG GCCGCGAGAG CCCCTGA
 
Protein sequence
MTTHTGAPDQ PSSAAEPGTA APQNAADQPG TPRIRVLLVD DQELFRSGIA VIVDAQDGLE 
VVGQAADGSE AVRMVDDLSP DVVLMDVRMP ELDGVEATRQ IFAPARAASR AGPVRVIVLT
TFDLDDRAAA AIRYGASGFL LKDATPAMLR DAIRTVHAGN AVLAPDDLST LLDGRFRARR
PSPPGLEDLT PKEREVLAAV AAGLNNAEIA RRAFVSESTV KTHVGAVLRK LGLRDRVQVV
VLAHEHGLVD PALGRESP