| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_16820 |
|---|
| Symbol | |
|---|
| ID | 8633318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1878747 |
|---|
| End bp | 1879415 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003314444 |
|---|
| Protein GI | 269794989 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00610406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGCA CCGGTGCGAC GGGACCCGGC ACAGGTCGCC AGCACGGACG TGGGGCGCGC
GTCGCCCGCG GTGGCGCGGC CGCGGTGCTC TCGACTGGGG TGGCGCTGGC CTCTCACCTG
CTCGCCGGTG CGCCGGTCCC CGGTGCTCTG GGGATCGTCG TACCCCTGGT GCTCGCCGCC
GCCGCGTGCA TCGTGCTCGC CGGGGTCCGG CTCTCCTCGC TGCGGCTGAG CCTCTCCGTC
GTGAGCAGCC AGCTGCTGTT CCACACGTTC TTCGTCCTGG GCACGGTCCC GGCCGGCACC
ACGGTGATGC CCGTCGGGGG CGGCAGGCAT GACCATCTCG GGCACGACGC CGACGTGGTC
GTCTCGACCG GCGCGAGCGC TGCGGCGCAC CTGGGGCACC TCGGGCACAC CGGCGGGTGG
ATGTGGCTCG CGCACGGGGC TGCTGCGACC GTGACGGTCC TCGCGCTGCG CCGAGGTGAG
CTGGTGCTCG CCCGGCTGCT GCAGGTCGCG TCTGCGGTTC TCGTCCGTGT CGTGCCGCGC
GTCGTCGCCG TGGTGGTCGA GCGATGCCCC CTGCCGGTCG TCGAGGGGCT GCTGTCTGCC
CGCCCGGCGC TCTCTGCCCT CACGAGCCCC GTCGCGCGAC GGGGACCGCC GGTCGTCCTG
GCCGTCTGA
|
|---|
| Protein sequence | MLRTGATGPG TGRQHGRGAR VARGGAAAVL STGVALASHL LAGAPVPGAL GIVVPLVLAA
AACIVLAGVR LSSLRLSLSV VSSQLLFHTF FVLGTVPAGT TVMPVGGGRH DHLGHDADVV
VSTGASAAAH LGHLGHTGGW MWLAHGAAAT VTVLALRRGE LVLARLLQVA SAVLVRVVPR
VVAVVVERCP LPVVEGLLSA RPALSALTSP VARRGPPVVL AV
|
|---|
| |