Gene Sked_16410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16410 
Symbol 
ID8633277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1842332 
End bp1843771 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content69% 
IMG OID 
Product6-phosphogluconate dehydrogenase (decarboxylating) 
Protein accessionYP_003314410 
Protein GI269794955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAC GCGCACAGAT CGGCGTCACA GGACTCGCAG TCATGGGTCG CAACCTCGCG 
AGGAACTTCG CCCGGCACGG GTACACCGTC GCCGTGCACA ACCGCTCCTA CGCCAAGACC
GAGTCGCTCA TCGCGGACCA CGGCACCGAC GGGGACTTCG TCCCGTCCGA GTCCATGGAG
GACTTCGTCG CCTCGCTCGC GCAGCCGCGC AAGGTCGTCA TCATGGTCAA GGCCGGCGGC
CCCACGGACG CGGTCATCGC CGAGCTCATC CCGCTGCTCG ACGAGGGTGA CATCGTCATC
GACGCCGGCA ACGCGCACTT CCCCGACACC CGTCGTCGCG AGGCCGAGCT CAAGGAGCAC
GGCCTGCACT TCGTCGGCAC CGGGGTCTCC GGTGGCGAGG AGGGCGCGCT CAACGGCCCG
AGCATCATGC CCGGCGGCTC CAAGGAGTCC TACGAGTGGC TCGGCCCGAT CCTCGAGGAC
ATCTCCGCGA AGGTCGACGG CGTGCCGTGC TGCACCTACG TCGGCTCCGA CGGTGCCGGC
CACTTCGTCA AGATGGTGCA CAACGGCATC GAGTACGCCG ACATGCAGCT CATCGCCGAG
GCCTACGACC TGCTGAAGCA GGGCCTGGGT GCCTCCGCCA AGGAGATCGG CGAGATCTTC
GCCGAGTGGA ACAAGGGCGA CCTCGAGTCG TTCCTCATCG AGATCACCGC CGACGTGCTG
CAGCACGTCG ACGCGGAGAC CGGCAGCGCC TTCGTCGACA TCATCCTCGA CCGCGCCGAG
CAGAAGGGCA CCGGCCGCTG GACGGTCCAG AACGCCCTCG ACCTCGGTGT GCCGATCACC
GGCATCGCCG AGGCGACCTT CGCGCGTGCG CTCTCCGGCT CCGTGCCGCA GCGCACCGCC
GCCAACGGTG TCCTCGAGGC CCACGCCGGC GCCTGGGACA TCACCGACCG CGAGGCCTTC
ATCGAGGACG TGCGCCTCGC GCTCTACGCC TCCAAGGTCG TCGCGTACTC GCAGGGCTTC
GACCAGATCG CGGCCGCGTC CGAGGAGTTC GGCTGGGACA TCGACCGCGG TGCGATGGCT
CGCATCTGGC GCGGGGGCTG CATCATCCGT GCCCGGTTCC TCAACCGCAT CACCGAGGCG
TACGAGCGCA ACGCCGAGCT GCCGCTGCTG CTCGCCGACG AGTACTTCGT CTCGGCCGTC
GGCCACGGTG TCAGCGCCTG GCGCCGCGTC GTGTCGCAGG CTGCCCTCAA CGGTGTGCCG
ACCCCGGCCT TCGCGTCGTC GCTGTCGTAC TACGACGGCG TCCGTGCGGA CCGCCTCCCG
GCCAACCTCA TCCAGGCGCA GCGCGACTTC TTCGGTGCGC ACACGTACCA GCGGACCGAC
AAGGCCGGCG TGTTCCACAC GGAGTGGTCG CTCGACCGCA GCGAGTCGAC CGAGTCCTGA
 
Protein sequence
MSARAQIGVT GLAVMGRNLA RNFARHGYTV AVHNRSYAKT ESLIADHGTD GDFVPSESME 
DFVASLAQPR KVVIMVKAGG PTDAVIAELI PLLDEGDIVI DAGNAHFPDT RRREAELKEH
GLHFVGTGVS GGEEGALNGP SIMPGGSKES YEWLGPILED ISAKVDGVPC CTYVGSDGAG
HFVKMVHNGI EYADMQLIAE AYDLLKQGLG ASAKEIGEIF AEWNKGDLES FLIEITADVL
QHVDAETGSA FVDIILDRAE QKGTGRWTVQ NALDLGVPIT GIAEATFARA LSGSVPQRTA
ANGVLEAHAG AWDITDREAF IEDVRLALYA SKVVAYSQGF DQIAAASEEF GWDIDRGAMA
RIWRGGCIIR ARFLNRITEA YERNAELPLL LADEYFVSAV GHGVSAWRRV VSQAALNGVP
TPAFASSLSY YDGVRADRLP ANLIQAQRDF FGAHTYQRTD KAGVFHTEWS LDRSESTES