| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_16010 |
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| Symbol | |
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| ID | 8633237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1790288 |
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| End bp | 1793818 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_003314370 |
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| Protein GI | 269794915 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.471767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0779461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCG CGCGCGCTGC TGCCCTGAAG TCCGCCATCG CCACCCGGGT CGTCGTCGCC
GACGGCGCGA TGGGCACAAT GCTGCAGGCG GCCGACCTCA GCCTCGACGA CTTCCAGGGG
CTCGAGGGCT GCAACGAGAT CCTCAACGTC ACCCGGCCCG ACGTCGTCGA GTCGGTCCAC
GACGCGTACT TCGCGGTCGG CGTCGACTGC GTGGAGACCA ACACCTTCGG GGCCAACTGG
TCGAACCTCG GCGACTACGG GATCGACGAC CGCATCTTCG AGCTCGCCGA GGCGGGTGCA
CGGGTCGCGC GGCGCAGCGC CGACAAGCAC GCCACGCCCG ACAAGCCACG CTGGGTCCTC
GGCTCGATGG GGCCGGGCAC CAAGCTGCCG AGCCTCGGGC ACACGAGCTA CGCGCACCTG
CGCGACACCT TCGCGCAGCA GGCCGCCGGT CTCGTCGCGG GCGGTGCCGA CGCGATCCTC
GTCGAGACCA GCCAGGACCT CCTCCAGACG AAGGCGGCGG TCAACGGGTC GAAGAAGGCC
ATGGCCGAGT CCGGCGTCGA GGTGCCGATC TTCGTCCAGG TGACCGTCGA GGCGACGGGC
ACCATGCTCA TGGGCTCCGA GATCGGTGCG GCGCTCACCA CGCTCGCCGC GCTCGGCATC
GACTCGATCG GCCTCAACTG CGCGACGGGT CCCGCGGAGA TGAGCGAGCA CCTGCGCCAC
CTCGCCAAGC ACTCGGCCGT CCCGGTCACC TGCATGCCCA ACGCCGGGCT CCCGGTGCTG
GGCGCGAACG GCGCGCACTA CCCGCTGAGC CCGGCCGAGC TCGCGGTGGC GCACCAGCAG
TTCGTCCGCG AGTTCGGCCT CGGCCTCGTC GGCGGGTGCT GCGGCACGAC GCCCGAGCAC
CTGCGGGCCG TGGTCGACGC CGTGGGTGGG GCGCCCGTCG TCGAGCGCAC CCCCGAGCCC
GAGAAGGGCG TCGCGAGCCT CTACACGCAC GTGGACTTCG ACCAGGACGC CTCGTTCCTG
GCCATCGGCG AGCGCACCAA CGCCAACGGC TCCAAGGCCT TCCGCGAGGC GATGCTCGCC
GAGGACTGGG ACGAGTGCGT GCAGATCGCC CGCGCGCAGA CCCGCGACGG CGCGCACCTG
CTCGACGTGT GCGTGGACTA CGTGGGCCGC GACGGCGTGG CCGACGTGCG CTCCGTGGTG
TCGCGCCTCG CGTCGGCCTC GACGCTGCCC CTCGTCATCG ACTCGACCGA GCCGCCCGTC
ATCCAGGCCG GCCTCGAGCT CGTCGGCGGA CGCGGCGTGG TCAACTCGGT GAACTTCGAG
GACGGCGACG GCGAGACCTC GCGCTACGGG CGCATCATGC CGCTGGTCAA GGAGCACGGC
GCGGCCGTCA TCGCCCTCAC CATCGACGAG GAGGGCCAGG CACGCACCGC CAAGACCAAG
CTCGCGATCG CGAGCCGGCT CGTCGACGAC CTCACCGGCC GGTGGGGCAT GGACGTCGCC
GACATCATCG TCGACACCCT GACCTTCCCG ATCGCCACCG GCCAGGAGGA GACCCGACGC
GACGCCATCG AGACCATCGA GGCGATCCGT GCGCTCAAGG CGAAGTACCC AGGGGTGCAC
ACGACCCTCG GTGTCTCGAA CGTGTCCTTC GGGCTCAACC CCGCCGCGCG CGTCGTGCTC
AACTCGGTGT TCCTGCACGA GGCGGTCCAG GCCGGGCTCG ACTCGGCGAT CGTGCACGCC
GCGAAGATCC TGCCCCTCGC CAAGATCCCC GACGAGCAGC GCAAGGCGGC CCTCGACCTC
GTGTGGGACC GCCGCGAGTA CGACGCCGAC GGCGCGATGA CCTTCGACCC GCTCGCACGC
CTCCTCGACC TCTTCGCCGG CGTCGACACC GCGGCGCTCA AGGACCAGCG GGCCGCCGAG
CTCGCCGCGC TCCCCCTCGG GGAGCGGCTC GAGCGGCGCA TCCTCGACGG CGACCTCAAG
GGCCTCGACA CCGACCTCGA CCTCGCGCTC GGCGAGGGCA TGACGGCCCT CGCGATCATC
AACGACCACC TGCTCGAGGG CATGAAGGTG GTCGGAGAGC TGTTCGGGAA GGGCGAGATG
CAGCTGCCCT TCGTGCTGCA GTCCGCCGAG GCCATGAAGA CGGCCGTGGC GTACCTCGAG
CCGCACATGG AGAAGACCGA CGAGGCCGGC AAGGGCACCA TCGTGCTCGC GACGGTGCGC
GGCGACGTGC ACGACATCGG CAAGAACCTC GTCGACATCA TCCTCACCAA CAACGGCTAC
ACGGTCGTCA ACATCGGCAT CAAGCAGACC ATCGCCGCGA TGATCGAGGC CGCCGAGGAG
CACCACGCCG ACGTCATCGG CATGAGCGGG CTGCTCGTGA AGTCGACCGT CGTCATGCGC
GAGAACCTCG AAGAGCTCAA CGCGCGCGGC CTGGCGCAGA AGTACCCCGT GCTGCTCGGC
GGCGCGGCGC TGACCCGCAC CTACGTCGAG GACGACCTCG ACGCCGTCTA CGACGGCCAG
GTCCGGTACG CCCGCGACGC CTTCGAGGGG CTGCGCCTCA TGGAGCCGCT CGTCCGGGTC
GCCCGAGGGG AGGACGTCGC CGCCGTCGGG CTGCCCGCGC TCAAGAAGCG CCGCCACGCG
ACGGTCACCG TCACGCAGAC CGCCGACGAG GACCTCCCCC CGCGCTCGGA CATCGCCTCC
GACAACCCCG TGCCGACGCC GCCGTTCTGG GGGTCGCGCA TCGTCAAGGG CATCCAGCTC
GCCGACTACG CCGCGTTCCT CGACGAGCGC GCGACCTTCA TGGGCCAGTG GGGCCTCAAG
CCCTCCCGTG CCGACGACTC CGCCAGCTAC GAAGAGCTCG TCGAGGTCGA GGGGCGCCCG
CGGCTGCGCG ACTGGCTCGA CCGCATCAAG ACCGAGGACA TGTTCGACCC GTCGGTGGTC
TACGGCTACT TCCCCGCCGT GGCCGACGGC GACGACATGG TGATCCTGCA CCACGAGGGC
CCGGACGGCG GCTCGGGCGG CGAGCCGGGC ACGGAGCGCA TGCGCTTCAC CTTCCCCCGG
CAGCGCCGCG ACCGGCACCT GTGCCTCGCC GACTTCGTCC GGCCGAAGGA CTCAGGCGAG
GTCGACGTCG TCGCCTTCCA GCTGGTGACG GTGGGCGCCT CCGTCGACCC GCACACCGCC
CGGCTGTTCG CCGAGAACCG GTACCGCGAG TACATGGAGC TGCACGGCCT CTCGGTGCAG
CTCACCGAGT CCCTCGCGGA GTTCTGGCAC TCCCGCGTCC GCGAAGAGCT CGGCTTCGCC
GCCGAGGACC CCGCAGACCT CGACGGCATG TTCAAGGTCG ACTACCGCGG CGCCCGGTTC
TCCCTCGGCT ACCCGGCATG CCCCGACATG GAGGACCGCC GCAAGGTGAT GGAGCTGCTG
CGCGCCGAGC GCGTCGGCGT CGTGCTCTCC GACGAGCTCC AGCTGCACCC TGAGCAGTCG
ACCGACGCGA TCGTGTTCCA CCACCCGGCC GCGAAGTACT TCTCGGTGTG A
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| Protein sequence | MLTARAAALK SAIATRVVVA DGAMGTMLQA ADLSLDDFQG LEGCNEILNV TRPDVVESVH
DAYFAVGVDC VETNTFGANW SNLGDYGIDD RIFELAEAGA RVARRSADKH ATPDKPRWVL
GSMGPGTKLP SLGHTSYAHL RDTFAQQAAG LVAGGADAIL VETSQDLLQT KAAVNGSKKA
MAESGVEVPI FVQVTVEATG TMLMGSEIGA ALTTLAALGI DSIGLNCATG PAEMSEHLRH
LAKHSAVPVT CMPNAGLPVL GANGAHYPLS PAELAVAHQQ FVREFGLGLV GGCCGTTPEH
LRAVVDAVGG APVVERTPEP EKGVASLYTH VDFDQDASFL AIGERTNANG SKAFREAMLA
EDWDECVQIA RAQTRDGAHL LDVCVDYVGR DGVADVRSVV SRLASASTLP LVIDSTEPPV
IQAGLELVGG RGVVNSVNFE DGDGETSRYG RIMPLVKEHG AAVIALTIDE EGQARTAKTK
LAIASRLVDD LTGRWGMDVA DIIVDTLTFP IATGQEETRR DAIETIEAIR ALKAKYPGVH
TTLGVSNVSF GLNPAARVVL NSVFLHEAVQ AGLDSAIVHA AKILPLAKIP DEQRKAALDL
VWDRREYDAD GAMTFDPLAR LLDLFAGVDT AALKDQRAAE LAALPLGERL ERRILDGDLK
GLDTDLDLAL GEGMTALAII NDHLLEGMKV VGELFGKGEM QLPFVLQSAE AMKTAVAYLE
PHMEKTDEAG KGTIVLATVR GDVHDIGKNL VDIILTNNGY TVVNIGIKQT IAAMIEAAEE
HHADVIGMSG LLVKSTVVMR ENLEELNARG LAQKYPVLLG GAALTRTYVE DDLDAVYDGQ
VRYARDAFEG LRLMEPLVRV ARGEDVAAVG LPALKKRRHA TVTVTQTADE DLPPRSDIAS
DNPVPTPPFW GSRIVKGIQL ADYAAFLDER ATFMGQWGLK PSRADDSASY EELVEVEGRP
RLRDWLDRIK TEDMFDPSVV YGYFPAVADG DDMVILHHEG PDGGSGGEPG TERMRFTFPR
QRRDRHLCLA DFVRPKDSGE VDVVAFQLVT VGASVDPHTA RLFAENRYRE YMELHGLSVQ
LTESLAEFWH SRVREELGFA AEDPADLDGM FKVDYRGARF SLGYPACPDM EDRRKVMELL
RAERVGVVLS DELQLHPEQS TDAIVFHHPA AKYFSV
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