| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_15880 |
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| Symbol | |
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| ID | 8633224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 1775638 |
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| End bp | 1777188 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | RNA polymerase, sigma 70 subunit, RpoD |
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| Protein accession | YP_003314357 |
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| Protein GI | 269794902 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.876653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.155423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCCCA TCTCTGCGAA TCCCGCCCTC CCGCGCGAAT TCGAGCACCC TGCTCTGCAA
GAACTCATCC GCCGTGGCTC GACCCACGGC CGTGTCGACG CAGAGTCCTT CCGCGACGCC
TGCGAGCAGG CGCAGGTCGC TGACGCCAAG CGCCTCAAGA CGGTGTTCCG CGCGCTCGTC
GCGGCCGGGG TCGACGTCGA CCTCCCGACC TCGACCGTCG CCGCGGCGTC GACCACCCGG
GCCACCAGCA CCACTGCGCG CGCGGTGAAG AAGGCGGCGC CCAAGAAGGC TGCCGCCGTG
ACCACGCGCA CCGTCGGCGA GCCCGCCCCG GAGCCCACCG AGGTGACCGG GTCGACCGTC
GCCGCCGAGT CGGTCGCGGC CGAGGCCGGC GACGCCCCGG TGACCACCAC CAAGCGTGCA
CCGCGCAAGA CGGCCGCGAA GGCTGCCCCC GCCAAGCGCG GACGCCGCAA GGCCGACGAC
GTCGACGAGG CCGAGCAGGC CGAGCCCGAG GCCGAGGAAG GTGAGGCGGG GGAGAGCCCG
GCCTCCGCCA AGAAGCAGGA GACCGAGGCC GCAGGCGGCT TCGTCTACTC CGACGCCGAC
GACGACGACC AGCCCGCCCA GCAGGTCGTC ACCGCAGGAG CGACCGCCGA CCCGGTCAAG
GACTACCTCA AGCAGATCGG CAAGGTCGCC CTCCTCAACG CCGAGCAGGA GGTCGACCTC
GCCAAGCGCA TCGAGGCCGG TCTGTTCGCC GAGGAGCGGC TCAGCGCCCC TGACGCCTCC
TTCGCGCCGA AGGCCCGCCG TGAGCTCGAG TGGATCGCCG GTGACGGACG TCGTGCCAAG
AACCACCTGC TCGAGGCCAA CCTCCGCCTG GTCGTCTCGC TGGCCAAGCG CTACACCGGC
CGCGGGATGC TGTTCCTTGA CCTCATCCAG GAGGGCAACC TCGGCCTGAT CCGTGCCGTC
GAGAAGTTCG ACTACACCAA GGGCTACAAG TTCTCGACCT ACGCCACGTG GTGGATCCGC
CAGGCGATCA CGCGTGCGAT GGCCGACCAG GCCCGCACCA TCCGCATCCC GGTGCACATG
GTCGAGGTCA TCAACAAGCT CGCCCGTGTC CAGCGCCAGA TGCTCCAGGA CCTGGGCCGC
GAGCCCACGC CGGAAGAGCT CGCCAAGGAG CTCGACATGA CCCCGGAGAA GGTCGTCGAG
GTCCAGAAGT ACGGCCGCGA GCCCATCTCC CTGCACACCC CCCTCGGCGA GGACGGCGAC
AGCGAGTTCG GTGACCTCAT CGAGGACTCC GAGGCGGTCG TCCCCGCGGA CGCCGTGAGC
TTCACGCTCC TCCAGGAGCA GCTCCACCAG GTCCTCGACA CGCTCTCCGA GCGTGAGGCC
GGCGTGGTCT CCATGCGCTT CGGCCTGACC GACGGCCAGC CGAAGACGCT CGACGAGATC
GGCAAGGTCT ACGGCGTCAC GCGTGAGCGG ATCCGCCAGA TCGAGTCGAA GACCATGTCG
AAGCTGCGTC ACCCGAGCCG CTCCCAGGTG CTGCGCGACT ATCTCGACTG A
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| Protein sequence | MAPISANPAL PREFEHPALQ ELIRRGSTHG RVDAESFRDA CEQAQVADAK RLKTVFRALV
AAGVDVDLPT STVAAASTTR ATSTTARAVK KAAPKKAAAV TTRTVGEPAP EPTEVTGSTV
AAESVAAEAG DAPVTTTKRA PRKTAAKAAP AKRGRRKADD VDEAEQAEPE AEEGEAGESP
ASAKKQETEA AGGFVYSDAD DDDQPAQQVV TAGATADPVK DYLKQIGKVA LLNAEQEVDL
AKRIEAGLFA EERLSAPDAS FAPKARRELE WIAGDGRRAK NHLLEANLRL VVSLAKRYTG
RGMLFLDLIQ EGNLGLIRAV EKFDYTKGYK FSTYATWWIR QAITRAMADQ ARTIRIPVHM
VEVINKLARV QRQMLQDLGR EPTPEELAKE LDMTPEKVVE VQKYGREPIS LHTPLGEDGD
SEFGDLIEDS EAVVPADAVS FTLLQEQLHQ VLDTLSEREA GVVSMRFGLT DGQPKTLDEI
GKVYGVTRER IRQIESKTMS KLRHPSRSQV LRDYLD
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