| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_15460 |
|---|
| Symbol | |
|---|
| ID | 8633182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1730411 |
|---|
| End bp | 1732156 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | 2-oxoglutarate dehydrogenase E2 component |
|---|
| Protein accession | YP_003314315 |
|---|
| Protein GI | 269794860 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACA CCGTGCAGAT GCCCGCACTG GGCGAATCAG TCACCGAAGG CACCGTCACC
CGTTGGCTCA AGGCCGTCGG CGAGACCGTG GAGCTGGACG AGCCCTTGCT CGAGGTCTCG
ACCGACAAGG TCGACACCGA GATCCCGTCG CCGTTCGCCG GCGTGCTCGA GAAGATCCTG
GTCGAGGAGG ACGAGACCGT CGAGGTCGGC GCCGCTCTCG CCGAGATCGG CTCGGGCGAG
GGCTCGAGCG ACTCGGCACC CGCCGAGGAG CCCGCAGCCG AGGCTCCTGC CGAGGAGGAG
GCACCTGCTG CCCCCGCCGC GCAGGACGAG TCTCCCTCCC CCGCCACCCC TGAGGCGAAG
GCCGACTCGG CCCCCGCCGA GGGCGGCGAC GGCGAGGAGA TCAAGCTCCC CGCGCTCGGA
GAGTCCGTCA CCGAGGGCAC CGTGACCCGC TGGCTCAAGG CTGTCGGCGA CACCGTCGAC
GTCGACGAGC CGCTGCTCGA GGTCTCGACC GACAAGGTCG ACACCGAGGT CCCGTCGCCC
ATCGCCGGCA CGCTCCAGAA GATCCTGGTC GAGGAGGACG AGACCGTCGA GGTCGGCACC
GTCCTCGCGA TCATCGGCTC CGGCGCTGCT GCTGAGTCGG CCCCGGCCGA GAAGGCTCCC
GAGCCGAAGG CCGAGGAGAA GGTCGAGGCT CCGAAGGCTG AGGCCCCCAA GGCCGAGGCG
AAGACCGAGG CGCCGAAGGC CGAGGCCCCC AAGGCCGACG CACCGAAGGC CGAGGCCTCC
GCGCCGTCGA CCTCCGGCGG CTCCTACCTC ACCCCGCTCG TGCGCAAGCT CGCGTCTGAG
AAGGGTGTCG ACATCTCGAC CGTCACCGGC ACCGGTGTGG GAGGACGCAT CCGCAAGGAG
GACGTCCTCG AGGCTGCTGC CAAGGCCGAG GAGGCCGCCA AGGCTGCTGC CGCCCCGAAG
GAATCGGCTC CGGCCGAGAC CGCACCGTCG GCCAAGCCCT CGAAGGCGTC GGTCCCCGAG
GTCTCGCCGC TGCGCGGCAC GACCGAGAAG GCCAGCCGCC TGCGCAAGAT CATCGCCGAG
CGCATGGTCG AGGCCCTGCA CTCGCAGGCG CAGCTCACCA CGGTCGTCGA GGTCGACGTG
ACCCGCGTCG CGCGCCTGCG CGCCAAGGCG AAGGACGGCT TCAAGGCACG CGAGGGCGCC
AACCTCACGT TCCTGCCCTT CTTCGCCCTC GCGGCGGTCG AGGCCCTCAA GGCCTACCCG
AAGATCAACG GTGTGCTCGA GGGCGACCAG ATCACCTACC ACGCACAGGA GAACGTCGGC
ATCGCCGTCG ACACCCCGCG CGGTCTGCTG GTCCCGGTCA TCCGCGACGC CGGTGACCTC
AACCTCGGTG GCATCGCCCG CAAGATCGTG GACCTCGCGA CGCGTACGCG CGACAACAAG
GTCGGTCCGG ACGAGCTCAG CGGCGCCACC TTCACGATCA CCAACACCGG CTCGGGCGGG
GCGCTCATCG ACACCCCGAT CGTCCCCGGC GGCACGTCGG CGATCCTCGG CACCGGCACG
ATCGTCAAGC GTCCCGCAGT GATCACCGAC GCCGACGGCG CCGAGGTCAT CGCGATCCGC
TCGATCTGCT ACCTCTCGCT CTCCTACGAC CACCGTCTGG TCGACGGCGC CGACGCGTCG
CGCTACCTCA CGGCGATCAA GAAGCGCATC GAAGAGGGTG CCTTCGAGTC CGAGGTCGGT
CTCTGA
|
|---|
| Protein sequence | MSDTVQMPAL GESVTEGTVT RWLKAVGETV ELDEPLLEVS TDKVDTEIPS PFAGVLEKIL
VEEDETVEVG AALAEIGSGE GSSDSAPAEE PAAEAPAEEE APAAPAAQDE SPSPATPEAK
ADSAPAEGGD GEEIKLPALG ESVTEGTVTR WLKAVGDTVD VDEPLLEVST DKVDTEVPSP
IAGTLQKILV EEDETVEVGT VLAIIGSGAA AESAPAEKAP EPKAEEKVEA PKAEAPKAEA
KTEAPKAEAP KADAPKAEAS APSTSGGSYL TPLVRKLASE KGVDISTVTG TGVGGRIRKE
DVLEAAAKAE EAAKAAAAPK ESAPAETAPS AKPSKASVPE VSPLRGTTEK ASRLRKIIAE
RMVEALHSQA QLTTVVEVDV TRVARLRAKA KDGFKAREGA NLTFLPFFAL AAVEALKAYP
KINGVLEGDQ ITYHAQENVG IAVDTPRGLL VPVIRDAGDL NLGGIARKIV DLATRTRDNK
VGPDELSGAT FTITNTGSGG ALIDTPIVPG GTSAILGTGT IVKRPAVITD ADGAEVIAIR
SICYLSLSYD HRLVDGADAS RYLTAIKKRI EEGAFESEVG L
|
|---|
| |