| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_14860 |
|---|
| Symbol | |
|---|
| ID | 8633122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1669465 |
|---|
| End bp | 1670301 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_003314256 |
|---|
| Protein GI | 269794801 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0324626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCA CCACCTGGCT GGTCCTCGGC CTCGTCGCGC TCTCCGTCGG CGTCTCCAAG
TCCGCGCTCC CGGGCCTGTC GACGCTCGGC GTCGCCCTGG TCGCCACCGT GATCCCCGCC
CGCGAGTCGA CCGGGCTCCT GCTCCTCCTG CTGATCTGCG GCGATCTCGT GGCGGTGAGC
AGCTACTGGC GCCAGGCGGA CTGGCGCCTC CTGCTGCGAC TCATGCTGCC CGTGCTGGTC
GGTGTGCTCG TCGGCGTCGC CTTCCTCGCG CGCGTCGACG ACCTCGTCAT GCGTCGGACC
ATCGGGGCCG TGCTCCTGCT GCTGCTCGCC GTCCGCGCGG TCCGTGCGAT CGTCGACCGT
AGGGCCGCGC GCCGGGCCAG CCGGGATGCC GAGGCTGACC CGGAGCCAGA CGTCGACCCT
GCCGCGGTGC CGGTCGCCGC GCTCGCGGCA AGCGCACCGG CCGACGGCTC GGGACCGCTC
CCCAGGCGCC ACGGCGCCGG CGTCTTCTAC GGGTCGCTCG CCGGCTTCAC CACCATGGTC
GCCAACGCCG GCGGGCCGGT GATGAGTCTC TACCTGCTGT CGACGGGCGC CACGAAGCTG
CGGTTCATGG GCACCGCGGC CTGCTTCTTC TTCGCGACCA ACCTCGTCAA GCTGCCCTTC
TCGATCGGCC TGTCCATCGT CACGGTCGAC ACCCTCCGCA CCGCCCTGGT GCTGGTGCCG
CTCGTGCTGC TGGGCGCACT GCTCGGCCGC CGGCTGCTCC GCACCATCAA GCAGTCCGTG
TTCGAACGCC TCGTCATCGT CATGACCGTC CTCGCCAGCC TGTTCCTGCT GCGCTGA
|
|---|
| Protein sequence | MTLTTWLVLG LVALSVGVSK SALPGLSTLG VALVATVIPA RESTGLLLLL LICGDLVAVS
SYWRQADWRL LLRLMLPVLV GVLVGVAFLA RVDDLVMRRT IGAVLLLLLA VRAVRAIVDR
RAARRASRDA EADPEPDVDP AAVPVAALAA SAPADGSGPL PRRHGAGVFY GSLAGFTTMV
ANAGGPVMSL YLLSTGATKL RFMGTAACFF FATNLVKLPF SIGLSIVTVD TLRTALVLVP
LVLLGALLGR RLLRTIKQSV FERLVIVMTV LASLFLLR
|
|---|
| |