Gene Sked_14410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14410 
Symbol 
ID8633077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1621037 
End bp1622539 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content70% 
IMG OID 
ProductNa+/H+ dicarboxylate symporter 
Protein accessionYP_003314211 
Protein GI269794756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCT CCACCACGAC GGACGCACAG ACTCCGTCGA CCGGCAAGCG CCGCTTCCGC 
GCCCCGTCCT TCAGCGTCCA GATCATCGGG TCGCTCGTCC TCGGCGTGCT GCTCGGCTGG
TGGGCCCTGT CCATGGGGAC CGTCGACGAC GGCACTCCCG AGGGCGGCGC CAACTGGCTG
ACCACGACCC TCGACACCAT CGGGTCGTCC TTCGTCCTGC TGCTGCGCAC CCTCGTGCCG
CCGCTCGTCT TCACCGCGAT CGTCGCGTCG ATCACCAACC TGCGGCACGT CGCCGACGGT
GCGCGCCTCG CTGCCAAGAC CCTCATGTGG TTCGCGATCA CCGCGCTCGT CTCCGTCGCG
GTCGGCATCG CGCTGGGCAT CATCATGCGC CCCGGCCAGA ACACCACCCT CGACATCGCC
GACGGCTCCG AGCCGGGCCG CACCGGCTCG TGGCTCGACT TCCTCGACAG CCTGCTGCCG
GCCAACTTCC TCGGACTGGG TGCTAACACC AGCACGCAGG TCGCCGAGAG CGGGGCCGTC
ACGGCCAGCA CGTCGCTGTC CTTCAACGTG CTGCAGATCG TGGTCATGGC CCTCGCGGTC
GGCATCGCCG CGCTCAAGGT CGGCCGCAAG GCCGAGCCGT TCCTCACCTT CAACCGGTCG
GCCCTCGAGA TCATCCAGAA GATCCTCTGG TGGGTCATCC GCCTCGCGCC GCTCGGCACC
CTCGGCCTCA TCGGCAACGC GATCGCCTCC TACGGCTGGG ACCTCCTGGC CCCGCTCGGC
ACCTTCGCCG CCGCGATCTA CATCGGCCTC GCGATCGTCC TGCTCGTGCT CTACCCGGTG
CTGCTGCGCA TCAACGGGCT CCGCGTCCTC AGCTACTTCC GCGGCGCCTG GCCCGCGATC
CAGCTGGCCT TCGTGTCCCG CTCGTCCATC GGCACCCTGC CGCTCACGCA GCGCGTCACC
GAGCGCAACC TCGGCGTGCC CAGCGCCTAC GCGTCCTTCG CCGTGCCGCT CGGCGCGACC
ACCAAGATGG ACGGCTGCGC CTCGATCTAC CCGGCGATCT CGGCGATCTT CGTCGCGCAG
ATCTTCGGCA TCGACCTCTC GGTCACCGAC TACCTGCTCA TCGCCTTCGT CTCCGTGATC
GGCTCCGCGG CGACCGCCGG GCTCACCGGC GCGATCGTCA TGCTCACCCT GACGCTCTCG
ACCCTCGGCC TCCCGCTCGC GGGTGTCGGG CTGCTGCTCG CCATCGACCC GATCCTCGAC
ATGGGCCGCA CCGCGGTCAA CGTCGCGGGC CAGGTGCTCG TGCCGGTCAT CGTGGCCAAG
CGTGAGGGCA TCCTCGACGA GGAGCAGTAC CGCTCCGCGA CCTCCGAGGA CCTCTTCGCC
GACGACGAGG AGGCCGAGGA GATCGTCGAC GAGGCGCAGG CCGACGCGGG CACGCCCGTC
ACGGTCGGCG CTCCGACGGT GACCGGCGCG CCGGTCCCCG AGGGGCGCGA CAAGAACTCC
TGA
 
Protein sequence
MTSSTTTDAQ TPSTGKRRFR APSFSVQIIG SLVLGVLLGW WALSMGTVDD GTPEGGANWL 
TTTLDTIGSS FVLLLRTLVP PLVFTAIVAS ITNLRHVADG ARLAAKTLMW FAITALVSVA
VGIALGIIMR PGQNTTLDIA DGSEPGRTGS WLDFLDSLLP ANFLGLGANT STQVAESGAV
TASTSLSFNV LQIVVMALAV GIAALKVGRK AEPFLTFNRS ALEIIQKILW WVIRLAPLGT
LGLIGNAIAS YGWDLLAPLG TFAAAIYIGL AIVLLVLYPV LLRINGLRVL SYFRGAWPAI
QLAFVSRSSI GTLPLTQRVT ERNLGVPSAY ASFAVPLGAT TKMDGCASIY PAISAIFVAQ
IFGIDLSVTD YLLIAFVSVI GSAATAGLTG AIVMLTLTLS TLGLPLAGVG LLLAIDPILD
MGRTAVNVAG QVLVPVIVAK REGILDEEQY RSATSEDLFA DDEEAEEIVD EAQADAGTPV
TVGAPTVTGA PVPEGRDKNS